Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02907 CCTAAATTCCTCCGAATTCAGAATAGGACCCTAAAAAGAAAATGGGAGAGGCGGAGGAGCTTCCCCGGTCTATTGTGCGCCGCGTGGTGAAGGATAAGTTGTCCCGTTGCGCTGAAGACGGAGACCTTTCCGTCAACCGAGACGCTCTTTCCGCATTTTCCGAAAGTGGTAGAATCTTCATCCACTACCTTTCCGCGACGGCTAATGACATATGTAAGGAGTCAAAGAGGCAGATTATCAATGCTGAGGATATTTTCAAAGCTCTGGAAGAAATTGAGTTCCTTGAGTTTGTTCGCCCTCTAAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGCTGGAAAGAAAGCTGCAGTGTCAAATGGAAAGGAAGATGAGCCCAAAAAGAAAAGGAAGTTGGAAGGGGAGCCATCTGATAAAGGGGAGTCATTTGATAAAGGCGAGGGTTCTGATGAAGGTGAGGGTGGTGACGAACAATGATTCAAAAAGATGAAGGGAGTTGCAGTTGTTATGACTAAACTAGGGCATTGCATTTCGTGTTATACTGATATTGTGCGTGGCTCTTTGTTAATTGGATGCTGCTGCATACTCTTTATTAATGTAACAAATATAGCTTTTTTATTGTTTCTCAGGAAAACACTTTTTCTATCCCCCTGATACAGGAGCAGTCTAGGAAAAAAAAGATATTCCTTCTTAAATATTTATAAGTTCCACAAGAGTAATTAAAGAAGTTGAATTGAGAAAA 744 0.4153 MGEAEELPRSIVRRVVKDKLSRCAEDGDLSVNRDALSAFSESGRIFIHYLSATANDICKESKRQIINAEDIFKALEEIEFLEFVRPLKASLEEFRKKNAGKKAAVSNGKEDEPKKKRKLEGEPSDKGESFDKGEGSDEGEGGDEQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02907 145 Gene3D Histone, subunit A 2 144 IPR009072 GO:0046982
Pste1g02907 145 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 5 137 - -
Pste1g02907 145 SUPERFAMILY Histone-fold 7 116 IPR009072 GO:0046982
Pste1g02907 145 FunFam DNA polymerase epsilon subunit 3 1 140 - -
Pste1g02907 145 MobiDBLite consensus disorder prediction 98 136 - -
Pste1g02907 145 MobiDBLite consensus disorder prediction 98 145 - -
Pste1g02907 145 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Pste1g02907 145 Coils Coil 58 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02907 7 95 CCAAT-HAP3 Transcription Factor Family AT4G14540 31.461 6.83e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pste1g02907 CBFD_NFYB_HMF 1.4e-08 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02907 1 12490885 12492637 Pste1g02907 1 12490885 12492637 ECH