Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02864 ATGGGAGATTATTCACACCCCAATTCAGAGTCTGCAATCAGAGCAAACCATGAGATACTAGCTTCAGTTACTGGAAGGCATGCCAACATAGTCTTCCTATGTAAATTGTTTATACTTGTCAGCCTCAGTGAAGCAAAAGCAGCAGTACTCCACCATTACAGCAAAAGCTTTCAAGGCTTCTCAGCTATGATTACACCAGAGCAAGCTACTCAACTTTCAGAATATAAATCAGTAGTGTCAGTTTTTGAGAGCAAAAAGAATAAACTTCACACAACACATTCTTGGGATTTTCTGGGATTAGAGACTATCTCCAAGAGCAATCCTAAAGCACTGGACATCGCATCTGATGTCATTGTTGGTGTCATTGACTCAGGAATCTGGCCGGAATCAGAAAGCTTCACTGATTATGGATTAGGTCCCGTGCCCAAAAAATTCAAGGGAGAGTGTGTTACTGGTTATAAATTTGCACTAGCCAATTGCAACAAGAAAATTATTGGTGCTCGGTTCTATTCCAAAGGGTTTGAAGCAGAAAATGGTCCTCTAGACGGCGTTGTAAACAAGATTTTTTTTCGGTCAGCTCGAGATAGTGATGGACATGGAACACACACAGCTTCCACAATAGCAGGGTCCCCTGTTGCGAATGCTAGCTTATTTGGCATTGCCAAAGGAACAGCTAGAGGTGGCGCCCCAAGTGCTAGACTTGCCATCTACAAGGCCTGTTGGTTTGGGTTGTGCAGTGATGCTGATGTTCTTTCAGCAATGGATGATGCCATCCATGATGGGGTTGACATACTATCTCTTTCCCTTGGTCCTGATCCGCCCCAGCCCATTTACTTCGAAAATGCAATCAGTGTAGGAGCATTCCATGCATTCCAAAAGGGTGTTCTTGTTTCTGCTTCAGCTGGAAACTCAGTTTTTCCACGTACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACAATAGACAGAAAATTCAGTTCTAATATCTACCTCGGCAACTCAAAAATTTTAAAGGGTTCTTCTTTGAATCCTATAAGAATGGAGCATTCGTATGGTTTGATATATGGAAGTTCCGCTGCTGCTGCTGGTGTTTCAGCAACAAATGCAAGCTTCTGCAAGAATAATACCCTAAATCCTACCTTAATCAAGGGTAAAATTGTAATATGCACAATTGAGAAATTTACTGATGACAGACTAGAGAAGGCCAGAGTAGTAAGGCAAGGTGAGGGTGTTGGAATGATACTTATTGATCATAATGCCAAAGATATTGGTTTTGAATTTGTCATCCCAAGCACTCTTATTGGTCAGGATGCCGTAGAAGAGCTTCAAGCATATATAAGGACAGATAAGAATCCCACCGCTAGAATCTACACAACAGTAACTGTAGTTGGTGACAAACCTGCTCCAGAAATGGCAGCCTTTTCTTCCATAGGGCCAAATATAATAACACCAGATATTATTAAGGCAAGTTTATTCGTATTAGTATGCTCTCATCCTACTATGCAGCCTGACATCACAGCACCTGGAGTGAATATTTTGGCAGCATGGTCTCCAGTGGCAACTGAAGCCACAGTGGAACAACTATCTGTAGACTATAACATCATTTCAGGAACATCAATGTCTTGTCCACACATAACTGCAGTTGCAGCAATTATAAAATCTCACCACCCACACTGGGGTCCTGCAGCCATAATGTCTTCAATATTGACAACAGCAACAGTTATGGATAACACACACCGCGTAATAGGAAGAGATCCAAATGGAACTCAAACCACACCATTTGACTATGGATCTGGACATGTTAACCCAGTTGCATCACTTAATCCAGGATTAGTATATGAATTTAATTCCCAAGATGTTCTCAATTTTCTGTGCAGCAATGGGGCAAGTCCAGCACAGCTTAAGAACCTCACTGGAGATCTTAATCAATGTCAGAAACCTCTTACAGCTTCCTATAACTTCAATTATCCTTCAATTGGTGTGTCCAACTTGAATGGAAGTTTATCAGTTTATCGTACAGTTACTTATTATGGTGAGGAATCAACAGTATATCATGTAAGTGTTGAAAATCCTTCTGGTGTGAATGTCACAGTTACACCAACAGAGCTGAAGTTCAGGAAAACTGGGGAGAAGTTAACTTTCAAGATTGATTTACTTCCTTTCAAGAATAGCAATGGAAACTTTGTATTTGGTTCCTTGATATGGAACAATGGCATACAGTGGGTTAGGAGTCCTATTGGTCTCAACGTACTATCTACTAGACGTTAA 2280 0.4118 MGDYSHPNSESAIRANHEILASVTGRHANIVFLCKLFILVSLSEAKAAVLHHYSKSFQGFSAMITPEQATQLSEYKSVVSVFESKKNKLHTTHSWDFLGLETISKSNPKALDIASDVIVGVIDSGIWPESESFTDYGLGPVPKKFKGECVTGYKFALANCNKKIIGARFYSKGFEAENGPLDGVVNKIFFRSARDSDGHGTHTASTIAGSPVANASLFGIAKGTARGGAPSARLAIYKACWFGLCSDADVLSAMDDAIHDGVDILSLSLGPDPPQPIYFENAISVGAFHAFQKGVLVSASAGNSVFPRTACNVAPWILTVAASTIDRKFSSNIYLGNSKILKGSSLNPIRMEHSYGLIYGSSAAAAGVSATNASFCKNNTLNPTLIKGKIVICTIEKFTDDRLEKARVVRQGEGVGMILIDHNAKDIGFEFVIPSTLIGQDAVEELQAYIRTDKNPTARIYTTVTVVGDKPAPEMAAFSSIGPNIITPDIIKASLFVLVCSHPTMQPDITAPGVNILAAWSPVATEATVEQLSVDYNIISGTSMSCPHITAVAAIIKSHHPHWGPAAIMSSILTTATVMDNTHRVIGRDPNGTQTTPFDYGSGHVNPVASLNPGLVYEFNSQDVLNFLCSNGASPAQLKNLTGDLNQCQKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYYGEESTVYHVSVENPSGVNVTVTPTELKFRKTGEKLTFKIDLLPFKNSNGNFVFGSLIWNNGIQWVRSPIGLNVLSTRR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02864 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Pste1g02864 759 Gene3D - 628 755 - -
Pste1g02864 759 Pfam Fibronectin type-III domain 657 750 IPR041469 -
Pste1g02864 759 CDD Peptidases_S8_3 88 577 IPR034197 -
Pste1g02864 759 CDD PA_subtilisin_like 332 460 - -
Pste1g02864 759 Pfam Subtilase family 115 585 IPR000209 GO:0006508|GO:0008236
Pste1g02864 759 Pfam Peptidase inhibitor I9 19 90 IPR010259 -
Pste1g02864 759 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Pste1g02864 759 PRINTS Subtilisin serine protease family (S8) signature 114 133 IPR015500 -
Pste1g02864 759 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Pste1g02864 759 Pfam PA domain 372 446 IPR003137 -
Pste1g02864 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 750 IPR045051 -
Pste1g02864 759 SUPERFAMILY Subtilisin-like 89 615 IPR036852 GO:0004252|GO:0006508
Pste1g02864 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 90 IPR037045 -
Pste1g02864 759 Gene3D Peptidase S8/S53 domain 116 623 IPR036852 GO:0004252|GO:0006508
Pste1g02864 759 ProSiteProfiles Serine proteases, subtilase domain profile. 94 611 - -
Pste1g02864 759 FunFam Subtilisin-like protease SBT1.5 116 340 - -
Pste1g02864 759 Gene3D - 326 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02864 Pste-Chr1 12240393 12244299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02864 41 750 Subtilisin-like Serine Gene Family AT2G04160 43.912 0.0 551