Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02863 GGAAAAGGAAAAGGAAAAGGAAAAGGCAGAGAAGTAGGATTTGGTCAAACATACATGCACCTAGTGATTATGAATAAAAAGAGATAGAGAAGATTTATGAATAAAAAGAAGTGACAGTAGGAAATAGTGAGAAGAGCAGAAGATGTTGTCCCCAAGAGACATGCCTTCCCCGTCCTCAATCTTCTCGGCATACGCGTCGATGACTGCGTCAATGATGCTCCTGCGTTCCATGGCCAACGAGCTCATTCCCCAACCCATCCGTGGGTACCTTATGAACGCCTTCCGGTACCTGATCAAGCCTCGCTCCCAGACCCTCACTCTCATCATCGAAGAGTCGACCGGAATAGCCCGTAACCAAGTGTACGATGCCGCTGAGGCCTACCTCTCCACCCGAGTCAGCCCCCAAAATGAAAGACTCAAGATCAGCAAGAGCCCCAAGGAGAAGAAATTGACCATTCGCTTGGAGAAGGGTGAGAAGGTCATGGACCCCTTCCACGGTGCCTCCTTCCACTGGAGATTCATCTGCGCCGAATCCGAAAAGAACAACCCCAACGATCACAACAACATCAACATCTCCTCCGTAAGGTCCGAAAAACGGTCCTTCGAGCTTAGCTTCCCCAACAAGTACAAGGAAATGGTCCTGGACTCCTACCTGCCCTTCATTCTGGAGAAGGCTAAGGAGATGAAAGACGACGAAAGGGTCCTTAAGATGCACACTCTTAACACCACCTATTGCTACAGCGGCGTCAAATGGGACTCCATAAATCTGGAGCACCCCTCCACTTTTGACACTTTGGCCATGGACCCGGAGCTGAAGAATGCCGTCATGGAGGACCTGGATAGGTTCGTCAAGAGGAGGGACTTTTACAAGAGGGTTGGAAGGGCCTGGAAACGTGGCTACCTTTTGTACGGCCCTCCCGGTACTGGCAAGTCTAGCTTGATCGCTGCCATGGCTAATTACTTGAAGTTTGACATCTTTGACCTCCAACTTGGCAACATAGTGCGGGACTCTGACCTCAGAAAGCTCCTCCTCGCTACTGCTAATAGGTCCATTTTGGTCATTGAAGACATTGATTGCAGTATCGATCTCCCTGACCGTGACCGCGACCGCGACCGTCGCCATCTAGATGCTCGTAAACAACCTGATCTACAGTTGACTTTGTCTGGATTACTGAACTTCATAGATGGGCTATGGTCTAGTTGTGGAGACGAGAGAATCATCATATTCACGACCAACCACAAGGAGAGGCTAGACCCAGCACTGTTGAGACCTGGAAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCAAGGCTTCAAGCTTTTGGCCTCAAACTACCTGCAAACACCCTCTGACCACCCCCTCTTTGGGGAGATAGAGGGGTTAATAGAGGACATACAGATCACCCCTGCACAAGTGGCCGAAGAATTGATGAAGGACGAAGACGCTGTGGCCACCCTTGAAGGATTCGTGAAGCTACTTAAGAGGAAAAAGATGGAAGGTGATGTGTGTGAGAATGGTCCTGATAAGGCAGAACCTCCTCATCAGCAATCTAAAAGGCGCAAGGTTGGTTGCAAGCAAAAACGAGGTGTGGGAATTAGCAAGACCAATACTGTCACCCAAAGAAGGACAAGAAGAATGAGAGGATGTAGCTTCTAATCACCTACTCTCTCCAATCTATATTGTCAAATAACTGTAATTGGAGCTACTAATTGTCTCCACAAATTAAAATCCCCTACATGTAGGCTTCGGGCTTTTGTTACTTTTAATCAAATGCTAAGAGGCTAGCTAGTTACATTTACTATCCAAACTTTGTGGTTGAACTTTCCCTGATGTATATGACCAGAAGAAAAGAATGAAAGGGAAGAGTGTGATTGCTAGTATCAGTAAAGGAACAATATATGTATGTACATCTAACTGTTTATAGTTGTAGTCGTAACAATGTGCACTACCCAGTACATTCAAACACAAGGTTCATCGTTTCCATGTCTGTACAGGTTAGATCTGTTAGACAACAGATGTTTTTTTTTCTGCTTTTATTTCTTTT 2054 0.4649 MLSPRDMPSPSSIFSAYASMTASMMLLRSMANELIPQPIRGYLMNAFRYLIKPRSQTLTLIIEESTGIARNQVYDAAEAYLSTRVSPQNERLKISKSPKEKKLTIRLEKGEKVMDPFHGASFHWRFICAESEKNNPNDHNNINISSVRSEKRSFELSFPNKYKEMVLDSYLPFILEKAKEMKDDERVLKMHTLNTTYCYSGVKWDSINLEHPSTFDTLAMDPELKNAVMEDLDRFVKRRDFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSIDLPDRDRDRDRRHLDARKQPDLQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYQGFKLLASNYLQTPSDHPLFGEIEGLIEDIQITPAQVAEELMKDEDAVATLEGFVKLLKRKKMEGDVCENGPDKAEPPHQQSKRRKVGCKQKRGVGISKTNTVTQRRTRRMRGCSF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02863 507 Gene3D - 385 456 - -
Pste1g02863 507 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Pste1g02863 507 Gene3D - 202 384 IPR027417 -
Pste1g02863 507 PANTHER BCS1 AAA-TYPE ATPASE 15 454 - -
Pste1g02863 507 MobiDBLite consensus disorder prediction 457 474 - -
Pste1g02863 507 CDD RecA-like_BCS1 228 386 - -
Pste1g02863 507 Pfam ATPase family associated with various cellular activities (AAA) 254 387 IPR003959 GO:0005524|GO:0016887
Pste1g02863 507 MobiDBLite consensus disorder prediction 486 507 - -
Pste1g02863 507 FunFam AAA-ATPase ASD, mitochondrial 205 384 - -
Pste1g02863 507 MobiDBLite consensus disorder prediction 457 507 - -
Pste1g02863 507 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Pste1g02863 507 SMART AAA_5 249 390 IPR003593 GO:0016887
Pste1g02863 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02863 Pste-Chr1 12225012 12233352 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02863 223 386 Calmodulin-binding Proteins AT3G56690 30.814 4.00e-12 67.0