Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02858 GTGTTTCAGTTTCAAGATTCGAAGTTCCACTCTTAACTCTCTTTGGTATCTTCATTATATACTTGAATCTTAATTGCTCCAATGGAAATGGAAAGCATAACGCACTTCCTTCAGGACAAAAGTATTTTGGTCACTGGTGCCACTGGATTCCTTGCCAAAATTTTTGTGGAGAAGATACTGAGAGTGCAACCGAATGTGAGGAAGCTTTATCTTCTTGTAAGAGCCAAAGATGCTGAATCTGCGTCTCGACGATTGCACAACGAGATTATAGGGAAGGACCTGTTTCGATTGTTGAAGGAAAATCTTGGTGCAAAGTTCAATACATTTGTTTCAGAAAAGTTGACTCTTGTGCCCGGGGACATTTCTCAAAAGGACTTGAATTTGAAAGACCCCATTCTACAGGAACAAATTTGTAATCAAATTCATTGTATAATCAATTTAGCTGCCACAACTAACTTTGATGAAAGATACGACGTTGCATTGGGTATAAATGCATTAGGAGTTAAGCACGTTTTGAACTTCGCCAAAAGTTGTGTTAAGCTAAAGGTGGTAGTCCACGTATCAACGGCATATGTTTGTGGCGAGAGAGGAGGACTCATAGTAGAAGATCCATGCCAATTGGGTGTGTCACTAAATGGAGTGTCAGGACTAGACATTGAAGTAGAAAAGAAAGTGGTGGAGGAGAAATTGAACCAACTTCAACAAGAGGGAGCCACAGAGGAGGATATTAAAGTGGCTATGAAAGACTTGGGTATGAAAAGAGCTACTTTATATGGATGGCCAAACACATACGTTTTTACAAAGGCAATGGGAGAAATGCTTTTACAAACTCTAAAAGAAAGCAAGTCTGTTGTTATTGTACGTCCTACAATTGTTACTAGCACTTACAAAGAACCTTTTCCTGGATGGGTAGAAGGTGTGAGAACCATAGATAGTATAATCGTTGCTTATGGAAAAGGAAAATTAACATTCTTCCTTGCGAACATTAAGGGAATTTTTGATGTGATACCAGCAGACATGGTAGTGAATGCAATAATAACAGCCATGGTAGGTTCCTCTGTTGCAAATCCAGTTAGATACCACAACCTCAGAGACTTCGGCTTTAGATATTTCAAGGCAAAACCTTTGGTAAATAAAGAGGGAATACCTATCAAGGTTGGTAAAGTTACTGTAATGGACAACATGGCTAGCTTTCAAAGATACATGTACATTCGCTACTTGCTTCCATTAAAGGTACTAGAGCTAGCCAATACTGCCTTTTGTCAATATTTTCAAGGTACATATCTTGACATCAAAAGGAAGATCCAAATAGTGATGCGATTGGTTGACCTTTATAGACCCTACTTGTTCTTCAATGGCGTATTTGATAATATGAACACAGAAAAGTTACAAATAGCAGCAAGACAAGGTGGGGAAGAGATGGAATATTTTTTTTACTTTGACCCTAAAATAATTGATTGGGAGGATTACTTCATGAATATCCATATTCCTGGCATAGTTAAGTATGTCTTTAAGTGATATGTAATCAGAAATTTGAATTTTTCTTTTAGCTTGTGTTTCGAAACTTGAAACCCATTGGGTTTTATAATAGCTAGATACATTAAACATTGTTGTGTTAATTAGTAGTTAATCTATTTGCAAATAGA 1646 0.3718 MEMESITHFLQDKSILVTGATGFLAKIFVEKILRVQPNVRKLYLLVRAKDAESASRRLHNEIIGKDLFRLLKENLGAKFNTFVSEKLTLVPGDISQKDLNLKDPILQEQICNQIHCIINLAATTNFDERYDVALGINALGVKHVLNFAKSCVKLKVVVHVSTAYVCGERGGLIVEDPCQLGVSLNGVSGLDIEVEKKVVEEKLNQLQQEGATEEDIKVAMKDLGMKRATLYGWPNTYVFTKAMGEMLLQTLKESKSVVIVRPTIVTSTYKEPFPGWVEGVRTIDSIIVAYGKGKLTFFLANIKGIFDVIPADMVVNAIITAMVGSSVANPVRYHNLRDFGFRYFKAKPLVNKEGIPIKVGKVTVMDNMASFQRYMYIRYLLPLKVLELANTAFCQYFQGTYLDIKRKIQIVMRLVDLYRPYLFFNGVFDNMNTEKLQIAARQGGEEMEYFFYFDPKIIDWEDYFMNIHIPGIVKYVFK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02858 478 Coils Coil 189 216 - -
Pste1g02858 478 CDD FAR_C 377 477 IPR033640 -
Pste1g02858 478 Gene3D - 5 360 - -
Pste1g02858 478 CDD FAR-N_SDR_e 13 348 - -
Pste1g02858 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 327 IPR036291 -
Pste1g02858 478 Pfam Male sterility protein 378 478 IPR033640 -
Pste1g02858 478 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 478 IPR026055 GO:0080019
Pste1g02858 478 Pfam Male sterility protein 17 318 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02858 Pste-Chr1 12146380 12153354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02858 110 477 Acyl Lipid Metabolism Gene Families AT4G33790 56.168 3.99e-160 457