Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02852 ATTACAGGGTTGGAAGTTTCAGAGTGTAGGAAGCAAATCATCACGACTCTCTCTATGGCTGGACCATCATGGTTGGTGGACAAAAGTAGGATTGCAACCAAAATAAAAAGTGCATCAGGAGCTTGTGATCCTGAAAAGGTTATATGGAAAAGCAATCCAACCAAGCCTTGCCCAAATTGTCAACATGCTATTGACAACAGTGATGTAGCTCAAGAGTGGCCTGGCTTACCAAAAGGAGTCAAATTTGATCCATCGGATCAGGAGATAATTTGGCACTTACTTGCAAAAGTTGGGGTAGGAGATTCAAAACCTCATCCTTTCATTGATGAATTTATTACTAATCTTGATGATGGAATTTGCTATACTCATCCTCAAAATTTACCTGGTGTTAAGCAAGATGGTAGTGCTTCCCACTTCTTCCATAGAGCAATCAAGGCTTACAACACTGGCACCCGAAAGCGCCGAAAAATACTAGGGCAAGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCAGTTGTCTTGTATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATGTGAGCAATGTAAGAGGAGGAAGAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTAGGAACAGAAGAGGATGAAAAAGATGGGGAGTACATTATCTCCAAAGTGTTTTATCAGCAGCAGCAAGTCAAATTGGGTGATAAAGATGACCGAGATATTCCTGAAGCCACTGAAACCAATGAATCAACAATTGTGAAAGTGGATCCAGTCACGCCCAAATTGGTGAGTCCTGAGCCTCCTTGTAATGAAAGATTGTGTCCAGAGCTAGACCTAGGACAAGAAACACATAACATTCCTCAGATGGATTGTTTAGATGAAATTCAAACTGATTTCCAAGACCTTGCAAATGAAACATCTATGTTAGAAACTGCAAATAATGAAGGGATGGATAATAAAGAAAATAATGCTGAGGAAGGCCAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTGGATTCTCAACAACTGGTTGAGGCACTGTCGCTGTGTGATGACCTACTCCATAGCCAATCTCCCAGTAGAGATGAAAAACATGAAGAACATAAGAACCAACCCAGTCTTTCTGTTTATGCTCAGCTAGGACCAGAACATCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGCCCTTGATCCTACAATTATAGAGAATGATACACCTTCAGAGTTTCGACTAAGCCAGCTGGAATTTGGTTCACAGGACAGCTTTACTTCTTGGGGCTATAGCAAGGCAGTGAACTAATATGGTTCTTCACCTCAGCTGGGGAATCTGATGTTTTGTAACTATATTTTGTTGTTGATCTTTTTGTAACTGATATTTATGGGCCAAACCTAATTCCTTTTGGTGGATGGGGTAAACTTAACTGTTACTCCTTTATTTGACTGATTGTGCTATTGTTGAAGGCAATGACCTTAGTTGCTTGATACTCTGATCAATTATTAGTGCTTAATTATACCTTGTTTTGGCTTGTTGATGTTATTGTTTCTTCC 1568 0.4011 MAGPSWLVDKSRIATKIKSASGACDPEKVIWKSNPTKPCPNCQHAIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGVGDSKPHPFIDEFITNLDDGICYTHPQNLPGVKQDGSASHFFHRAIKAYNTGTRKRRKILGQDFGDVRWHKTGRTKPVVLYGVQKGCKKIMVLYVSNVRGGRAEKTNWVMHQYHLGTEEDEKDGEYIISKVFYQQQQVKLGDKDDRDIPEATETNESTIVKVDPVTPKLVSPEPPCNERLCPELDLGQETHNIPQMDCLDEIQTDFQDLANETSMLETANNEGMDNKENNAEEGQKWWDSESQNLLDSQQLVEALSLCDDLLHSQSPSRDEKHEEHKNQPSLSVYAQLGPEHLKKDIEECQNLALDPTIIENDTPSEFRLSQLEFGSQDSFTSWGYSKAVN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02852 421 MobiDBLite consensus disorder prediction 343 363 - -
Pste1g02852 421 Gene3D NAC domain 67 219 IPR036093 GO:0003677|GO:0006355
Pste1g02852 421 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 381 IPR044799 GO:0003700
Pste1g02852 421 FunFam NAC domain-containing protein 8 67 218 - -
Pste1g02852 421 SUPERFAMILY NAC domain 43 214 IPR036093 GO:0003677|GO:0006355
Pste1g02852 421 ProSiteProfiles NAC domain profile. 58 214 IPR003441 GO:0003677|GO:0006355
Pste1g02852 421 MobiDBLite consensus disorder prediction 344 359 - -
Pste1g02852 421 Pfam No apical meristem (NAM) protein 59 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02852 Pste-Chr1 12078271 12083653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02852 14 221 NAC Transcription Factor Family AT1G28470 51.598 5.23e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste1g02852 NAM 1.9e-20 No_clan