Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02846 CTTCAAAGGGTTTCCCACCTTTCCCAAACTCTCATAACTTCCATTCAAACGTGCCCACTCGAAAACCTTCGATCTCGTCGGCGATGATGAGCGGCGACGGTCGAAGGCGTGGCCGGAGAGACTCCAGGGCTTCGAGGAAGCGGAAGCTGAACCGCACCCCGGAAGAAGAGCTCGAAGCAAAACTAGGGTTCGATCTGTTTTCAGAGGGTGAAAAGCGACTCGGTTGGTTACTCACTTTTGCATCCTCATCTGTTGACGATGAGGATAGTTACAAAGTGTACAGTTGCATCGATCTTTACTTTGTTGCACAGGATGGCTCTTCATTCAAGACAAAATTCAGATTTCGGCCTTATTTCTATGTAGCTACAAAGGTTAAAATGGAGATGGATGTTGAAGCATATATGAGAAGACGTTATGAAGGTCAAATTGCAGATATTGAAATTGTAGAGAAAGAAGACCTGGATCTTAAAAACCATTTATCCGGGTTAAGAAAATCTTATTTAAAGCTTTCATTTGATACTGTGCAACAATTGATGGATGTGAAGAGAGACTTGATGCCTTCTGTTGAAAGAAATAAGGCCAAGTCTGATGCTGCAGAAGCCTTTTTGTCCATTTCAACAGAAAGAAGAGAACATAAACCTCAGGATTTTCTAGATTGCATAACTGATCTTCGTGAATATGATGTTCCTTATCATGTTCGTTTTGCCGTTGACAATGATATACGGTGTGGTCAGTGGTATGATGTTGGAGTGTCCAACAAAGGGGTTACACTTGAGAAGAAGACAGATCTTCTGCAACGTGCTGAAGTTCGTATCTGTGCATTTGACATTGAGACCACAAAACTTCCACTAAAATTTCCTGATGCCGACTATGATTTGATTATGATGATTTCATACATGATAGATGGTCAAGGGTATTTAATCATAAATAGAGAGTGTGTCGGGGATGATATAGAAGATATAGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTGAACTTCTTAGATTATGGTTTTCTCATATGCAAGAGGTAAAACCTGGTATCTACGTGACTTATAACGGTGATTTCTTTGATTGGCCATTCCTGGAAAGAAGGGCAATCCATCTTGGGCTCAAAATGAGTGATGAGTTGGGGTTCAAATGTGATATGAATCAGGGAGAATGTCGTGCTAGATATGCTTGCCATTTGGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGGAGCCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCATTGGAGGTGAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCCTCCTATTCTGTTTCTGATGCAGTGGCAACTTATTATTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCAACTATTATACCCATGTCACCAGATGAGGTATTGCGCAAAGGTAGTGGAACCCTCTGTGAAATGTTGCTTATGGTGCAGGCATACAAGGCTAATGTTATATGCCCTAACAAACACCAATCTGATCTAGAGAAGTTTTATAAAAATCATCTTCTTGAGAGTGAGACATACATTGGAGGTCATGTGGAATGTCTTGAAACTGGTGTATTCAGATCTGATATTCCATCTAGTTTTGCACTCAAGCCATCTGCTTATCAGCAACTGATAAACAACCTTGATCGAGATCTACAGTATGCTATAACTGTGGAGGGTAACATGGATTTGGAATTTGTTTCTAATTATGATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTAAAATTACGAGATGCGCCAATATGTGAAGAATGCCCTCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGACTTCAGAATTTTGAAACTTCTGATACATATGAATCTTCCATTCCCTTGAATTTTGAATTGCAGCCACCGTCAATTGTTACGGATGAAGTGTGCACTGCATGTGACTTTAATCGTCCTGGAAAGACTTGCCTACGCAAGCTTGAGTGGGTTTGGCGTGGAGAAGCATACATGGCAAAGAAAAGTGAGTATTATGCTTTAAAGACACAGATTGAATCAGAGTTTGTTGATTATTCTGAGAACAACAACAAATCCTTATCCCACTATTCTGATAAGAGGTCATCAAAATCTTTTCTTGACCTTCCCAAGTCAGAGCAACAATCAAGACTGAAAGAGCGTTTGAAGAAATACTGCCAGAAGGCATATAAACGGGTACTTGACAAACCTGTTGCTGAACTTCGTGAAGCAGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTACGCAGCCCTGATTTTGTGCTATCTGGTTCAAGTTTCCGGGATAGAAGATATGAATACAAAGGTCTCAATAAGGTTTGGAAGGGAAAACTGTCAGAGGCCAAGGCTAGTGGAAATTCTATGACGATTCAGGAAGCACAAGATATGGTTGTTCTTTATGATTCATTGCAACTTGCTCATAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACATATACTGGCGCGAAAATCATTCAGAATGCCCGCTTGCTAGTGGAGAAAATAGGAAAACCACTTGAACTAGACACAGATGGTATCTGGTGTGCACTACCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACCCAAAGAAGAAGTTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAACACAAATGATCAGTACCAGACACTCACAGATCCAGTCAGGAAAACTTATACAGCTCGTAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCCTTCCCGCTTCCAAGGAAGAAGGAATTTTAATTAAGAAGCGGTATGCTGTTTTTAATGATGATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAGCGGAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGTTCAACCTTAGAGGAATGCTATTCGGCTGTTGCTGCAGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATTGCAGACAGTGAGTTGCTTGATTATATATCGGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACAACTGCTAGACGTCTAGCTGACTTCCTTGGCGATACAATGGTCAAGGATAAAGGTCTTCGATGTCAGTACATAGTTGCTAGTGAACCCAAGGGCACACCAGTAAGTGAGCGCGCTGTTCCTGTGGCAATATTTGAAACGGATGCTGAGGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATCCGATCCATAGTTGACTGGTCCTATTATAAGCAGCGTCTTAGTTCTGCAATTCAAAAAATTATCACTATTCCCGCTGCAATGCAAAAGGTTGCAAATCCCGTCCCTAGGGTGGTTCATCCTGATTGGTTGCATAAGAATGTGCGTGAGAAGGAGGACAGGTTTCGCCAGCAGAAATTAGTGGTTACCTATAAATCTATGAACAGAAATGAGCACTCAAAAAAGCATAATGACTCAAATTGCGTCCCTCTAGTGATGGATGATAAGATTGTTAATGATTTGGAGGACTATGGAAACAAGACCAGGAGTTCTACGTGCAGACCTAGACCAATTATACGACATTATGAAGCTAATAATGAACGACATTCAAGGAAGCTCGGTGATCAAGAAGATTTGGAGGAGCGGCTCAATAATGATAGAAGCAGCAATGGCCAGCTATTTTCACCATCACAACAAAATGAAATATGTGAAAATGTTGACAGAAATGTAGATTATCAAGGATGGCTTCAAATAAAGAAGCGGAAGTGGAAAGATGTTCTACAAAAGAGAAAGAAGCGAAGATTGGAGAATTTAAAGAATTCAGGCCATGTAAATGGTGTTCTTGAACAAATGAGTGGTAAAGGGAGTCAGAGCAGAAGTCATGTTAGTTCATATTTTAAAAGGCCTGAGGCAGACTTAACAAAGCGTCATTGGCAGATAGTACAACTAGTTCCCAGTTCACTGATTGGCCAATTTTTTGCTTGGGTTGTTGTTGATGGGAGTATGCATAAGATTCGCGTTTCTGTTCCCAGAGTCTTTTACCTCAATTCAAGATCATCAATTACTGAGGAATTTATGGCTAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACCTGTATGAGGTTTCAATGAATGAAATTCAATATGGGGAAGCAAGCAAAAAACTTGCTGCTCTTCTAGCGGATCCAGATGTTGAGGGAATATATGAAACCAAGGTACCACTGGAGTTTAATGCAATAATCCAGCTTGGTTGTGTATGTAAGGTGGACAAAACTGCCAATAAACGTAGTCTACAAGATCTGTGGAATTTGAGTGAATTGCACATGAAGACCACAACTGAATGTGCTTATCTTGAACAATCTATATCTTTCTTTTATTTTTACCATAGCATCTCTGAGGGACGTGCTATATATGTTGGATATTTCCCTGCATCAAAAGCAATAACTGTTGTGGTAGTTAATCCCTATCAAAACAAAGATTTATCACCAACTTTTCTAGATAGACAATTTCAAGATGCATGTCAGGCTTTGTCTATTGAGCCACCACCGAGGAATGAAATTAATTTTAAGATTTCATTTTTTGAAATTGAAATCCCAAAAATAGGCCCCCCAAAAGCCCTAAGTTCAAAGGGCTCTCACAGAATCAACACTAGTGCCATTGCCACTGCTATTCAGCTTTCTATTTGGTCCACTATGGCCACTGCATTAAACTGCCTTACTACAGTATCCCATATAGTGGGCAAGGACCGCTCTGCATTGCTACATATTGCTATAGCAGCAGTGGATTACGTTGCACAGGTCAAAGATGCCGAAACAGTGATGCAAAGAGCAATAAATGGTCACAGTCCTGGGAGGGAAAATAATGTGCCTATGGTTGCTGTCATTGAATGTCCAAATGTTCAACTAGTAAAATCAGGCATCCGAGCTCTTGATGATTTTCCATGCCTGAGTGTTCCATATAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAATTTGCTGGTAAAACTGCAATGCAACGATGTGCTGCTTCGGTCCAATGGCTAAATCGAAGAATTGCTCTCTCAAGATATGCCCATGTACCGCTGGGGAACTTTGAACCTGACTGGCTTATATTTACTGCCGATATCTTCTTTTCTAGAGCCTTGCATGATAATCAACAGTTACTTTGGATATCTGATGATGGCCTTCCAGATTTGGGTGGCATTACCAGCGAACAGAACTGTTTTGTTGACGAGGTCTACCAACCAGTTCGAACGTATCCTGGAGCTTATAGAAATGTAACTCTGGAGCTAAAGATACACCACCTGGCTGTAAATGCTCTTGTCAAATACAACCTAATTAATGAAATGGAAGGAGGCACTCTATTCAGATCTGATCGGGAACTTGATTCTGGAGCATTTTCCATCAATGATCAGAATGGTTTTGACGAGTCTACAGCATGTGCACAAGCCATTAGGGTCCTTAAACAGTTGATCCAACGGTGCCTAGCAGATGCAGTTACATCAGGAAATGTTTATGCTGATGAAATTTTGCGACATCTATATAGATGGCTTTGCAGGTTTGCTTGCCATGTCATGCAAAAGGTCTTCGCATTGTTGTTGGCAGAGTTCCGCAAGTTAGGTGCTACAATTGTGTTTGCAAACTTTTCAAAGATTATTATAGACACTGGGAAATATGATCTGTCTAGTGCCGAAGCTTACTGTGATAGTTTGTTGAAAACTATACAATCTAGAGATCTATTTGAATGGATTGAGCTTGAGCCACTGCAGTTCTGGTGCTCGCTGCTATTCATGGATCAGTATAACTATGGTGGAATACCAGCAAAATCTGATGAAACCATGAATGATAAATCTCGAGTAGACATTATGTTGAGCTGGAATATTGCTGAATACTTGCCGAAAAAAGTCCAAGATCATTTTGTTTTCATTGTTTCTCAATTCATGTATATGCCCTGGAATTATGCACGAGAACAAGCACAAATGAGAGCCTCATTGCAGAATGGTGACCTCTGTACCCCATCAATTAACATCGGAGCTGCAGAGGCTTTTGAATCAGAAATAACGGAATATATCAGAGAGCAGATTAGCTCTTACTTTGCTGACAAACTGCTAGGAATTGTTCACAATATTGGTGTTCATATGAAAGGAGTTAATAGACCAGAAAACCTTATGAGTGATGCCCATAAAGGAGATGCTGCCTTGGAATTTATCAAGCATGTCTGTGCTGTCCTGGCCCTTGACCAAAGTGTGCAGCATGAAGTTTTGGTCTTGAGAAAGAATTTGCTCAAATATGTTAATACCAAAGAGTTTGCTCCAGCAGCTGAGTTTCACAATGTTTGTCATTCCTTTAGCTTACCAAATGTCATCTGCAGCTACTGTAATGATTGTAGAGACTTGGACTTGTGTCGTGATTCGGCTTTATTAACTGAGGAGTGGTGCTGTGCAGTGCCACAGTGTGGCCAGCCATATGACCGTGAGGTAATGGAGAATGCCCTTCTCCAGACTGCAAGACAAAGAGAACGGCTATATCACCTGCAAGATCTGATGTGTATCAGGTGCCATCAAGTGAAAGCTGCACATTTGGCTGAGCAATGTGCATGTGGAGGCTCATTTAGGTGCAAGGAAGTTGCAAGTGAATTTCGTGAAAAGATGCAGGTTTTGTTTAACGTAGCTTCTCGTCAGAAATTCCAACTTCTCCAAGAATGTACCTCTTGGACTTTAGAACTTAGATAGTTTAAACTTAAGTGAGCGCCTAGGATCAAAGTAACAGTCCATGTATACAATGGGTCCCCTGAAAGTGCATGGTGGGAAGAAAAATGTCCCAACCTGCTTGACAGCTTGTGACCAACGATGTGCTTGTTTGACACTACTATTAATCAATTCTTTTATTCTAGTTGTCATCCGCATGATGGTAACTTATATGTATAAATGTTCATCGTGATCAATAAAATATCTATCTTGTTGTCCC 7227 0.4058 MMSGDGRRRGRRDSRASRKRKLNRTPEEELEAKLGFDLFSEGEKRLGWLLTFASSSVDDEDSYKVYSCIDLYFVAQDGSSFKTKFRFRPYFYVATKVKMEMDVEAYMRRRYEGQIADIEIVEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPSVERNKAKSDAAEAFLSISTERREHKPQDFLDCITDLREYDVPYHVRFAVDNDIRCGQWYDVGVSNKGVTLEKKTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMIDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAIHLGLKMSDELGFKCDMNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDLEKFYKNHLLESETYIGGHVECLETGVFRSDIPSSFALKPSAYQQLINNLDRDLQYAITVEGNMDLEFVSNYDEVKNAIMEKLVKLRDAPICEECPLIYHLDVAAMYPNIILTNRLQNFETSDTYESSIPLNFELQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEAYMAKKSEYYALKTQIESEFVDYSENNNKSLSHYSDKRSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVAELREAGICMRENPFYVDTVRSPDFVLSGSSFRDRRYEYKGLNKVWKGKLSEAKASGNSMTIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDPKKKLTISYPCVMLNVDVAINNTNDQYQTLTDPVRKTYTARSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKNVREKEDRFRQQKLVVTYKSMNRNEHSKKHNDSNCVPLVMDDKIVNDLEDYGNKTRSSTCRPRPIIRHYEANNERHSRKLGDQEDLEERLNNDRSSNGQLFSPSQQNEICENVDRNVDYQGWLQIKKRKWKDVLQKRKKRRLENLKNSGHVNGVLEQMSGKGSQSRSHVSSYFKRPEADLTKRHWQIVQLVPSSLIGQFFAWVVVDGSMHKIRVSVPRVFYLNSRSSITEEFMAKRVNKTLPHGRHSYNLYEVSMNEIQYGEASKKLAALLADPDVEGIYETKVPLEFNAIIQLGCVCKVDKTANKRSLQDLWNLSELHMKTTTECAYLEQSISFFYFYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSPTFLDRQFQDACQALSIEPPPRNEINFKISFFEIEIPKIGPPKALSSKGSHRINTSAIATAIQLSIWSTMATALNCLTTVSHIVGKDRSALLHIAIAAVDYVAQVKDAETVMQRAINGHSPGRENNVPMVAVIECPNVQLVKSGIRALDDFPCLSVPYNARDSQYQILGWQQFAGKTAMQRCAASVQWLNRRIALSRYAHVPLGNFEPDWLIFTADIFFSRALHDNQQLLWISDDGLPDLGGITSEQNCFVDEVYQPVRTYPGAYRNVTLELKIHHLAVNALVKYNLINEMEGGTLFRSDRELDSGAFSINDQNGFDESTACAQAIRVLKQLIQRCLADAVTSGNVYADEILRHLYRWLCRFACHVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSSAEAYCDSLLKTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDETMNDKSRVDIMLSWNIAEYLPKKVQDHFVFIVSQFMYMPWNYAREQAQMRASLQNGDLCTPSINIGAAEAFESEITEYIREQISSYFADKLLGIVHNIGVHMKGVNRPENLMSDAHKGDAALEFIKHVCAVLALDQSVQHEVLVLRKNLLKYVNTKEFAPAAEFHNVCHSFSLPNVICSYCNDCRDLDLCRDSALLTEEWCCAVPQCGQPYDREVMENALLQTARQRERLYHLQDLMCIRCHQVKAAHLAEQCACGGSFRCKEVASEFREKMQVLFNVASRQKFQLLQECTSWTLELR 2302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02846 2302 FunFam DNA polymerase epsilon catalytic subunit 57 228 - -
Pste1g02846 2302 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
Pste1g02846 2302 SMART DUF1744_2 1554 1998 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pste1g02846 2302 FunFam DNA polymerase epsilon catalytic subunit 241 469 - -
Pste1g02846 2302 SUPERFAMILY DNA/RNA polymerases 487 1155 IPR043502 -
Pste1g02846 2302 Gene3D - 981 1165 IPR042087 -
Pste1g02846 2302 Gene3D Palm domain of DNA polymerase 798 977 IPR023211 -
Pste1g02846 2302 CDD POLBc_epsilon 504 1162 - -
Pste1g02846 2302 CDD DNA_polB_epsilon_exo 241 444 - -
Pste1g02846 2302 Pfam Domain of unknown function (DUF1744) 1650 1998 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pste1g02846 2302 Gene3D - 239 469 IPR036397 GO:0003676
Pste1g02846 2302 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 17 2300 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Pste1g02846 2302 FunFam DNA polymerase epsilon catalytic subunit 981 1165 - -
Pste1g02846 2302 FunFam DNA polymerase epsilon catalytic subunit 790 977 - -
Pste1g02846 2302 Gene3D DNA Polymerase, chain B, domain 1 53 230 - -
Pste1g02846 2302 SMART polmehr3 240 882 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pste1g02846 2302 SUPERFAMILY Ribonuclease H-like 65 491 IPR012337 -
Pste1g02846 2302 MobiDBLite consensus disorder prediction 1 28 - -
Pste1g02846 2302 Pfam DNA polymerase family B 799 1104 IPR006134 GO:0000166|GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02846 1650 2192 Core DNA Replication Machinery Family AT1G08260 50.357 1.21e-157 539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02846 1 12027636 12054931 Pste1g02846 1 12027636 12054931 ECH