Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02844 ATGGACAGCAACCATCTAACGGACGACCTCCACAGTCTAAGCTTGGCTTCCTCCCACGAGCTCTGCTCCTCCTTCGTCCACGGCAGCAGCCGCACCCTCCCCCTGGCCCTCTCCGACCTCCGCTTCACCCGCCGCCTCGGCTCCGGCGACATGAGCGTGGTCTACCTGGCCGAGCCGAAGGAGGGAGGCGGCGCGGTGTTCGCGGCTAAGGTGATGGAGAAGGAGGACTTGGCCAGGAGGAACAAGGAAGGGAGGGCCAGCACCGAGAGGGAAATTCTCCAAATGTTGGATCATCCCTTCCTTCCCACGCTCTACGCCTCCATCCACTCTCCTAAATGCCTCTGTTTCCTCACCCCCTTCTGCCCCGGCGGTGATTTGCACCTCCTCCGCCACCGATTCCCCAACAAACGCTTCCTCGATTCCGCCGTCAGGTTCTATGCATCAGAAGTGTTGTTGGCACTTGAATACCTGCACATGTTGGGTGTAATATACCGCGACCTGAAGCCTGAAAACGTGTTGATTAGATCAGACGGGCACATCATGCTGACAGACTTCGACCTGTCGTTAAAATGCGAGGATTCCACATCAACGGCTCAAATAATCTCCGATGAAAAGGGTCCTCGGACAATCCCAGGGAAGGATTCTCACGTGGAAGCGGCACGCGTGACTGCGTCGTCGTGCATAATGCCGAAGTGCATAGTCCCCACAGCATCCTGCTTCCACCGAAAACGCAAGCGAAAGAAGAAGAAAAGCATGCGTAATGGGCCTGCATTTGTGGCGGAGCCCATTAATGTTCGGTCAATGTCGTTCGTTGGGACTCACGAGTACTTGGCGCCGGAGATCGTGTCGGGTGAGGGGCACGGTAGTGCGGTGGACTGGTGGACATTGGGGATATTTATGTTCGAACTGTTTTACGGAGTGACACCATTCAAGGGCATGGAGCACGAGTTAACGCTTGCCAACATTGTGGCTCGAGCACTTGAGTTCCCCAAGGAACCGGTGGCTTCGGGTGCCATGAAAGACCTTATATCGCAGCTGCTGGTTAAGGACCCCGCCAAGAGACTTGGGTCCGTCTTTGGAGCTACTGCCATCAAACACCACTCCTTTTTTCAAGGCGTCAATTGGGCGCTGCTAAGGTGTACCACTCCACCCTTTGTACCACCTTCCCCATCTAGTGGAAAACCTCTACCTGATCACCATCACATTTTCATTGACTGTTATTAA 1224 0.5498 MDSNHLTDDLHSLSLASSHELCSSFVHGSSRTLPLALSDLRFTRRLGSGDMSVVYLAEPKEGGGAVFAAKVMEKEDLARRNKEGRASTEREILQMLDHPFLPTLYASIHSPKCLCFLTPFCPGGDLHLLRHRFPNKRFLDSAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCEDSTSTAQIISDEKGPRTIPGKDSHVEAARVTASSCIMPKCIVPTASCFHRKRKRKKKKSMRNGPAFVAEPINVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMEHELTLANIVARALEFPKEPVASGAMKDLISQLLVKDPAKRLGSVFGATAIKHHSFFQGVNWALLRCTTPPFVPPSPSSGKPLPDHHHIFIDCY 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02844 407 Gene3D Transferase(Phosphotransferase) domain 1 266 388 - -
Pste1g02844 407 Gene3D Transferase(Phosphotransferase) domain 1 125 200 - -
Pste1g02844 407 FunFam Serine/threonine-protein kinase OXI1 125 193 - -
Pste1g02844 407 Gene3D Phosphorylase Kinase; domain 1 39 124 - -
Pste1g02844 407 Pfam Protein kinase domain 43 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02844 407 Pfam Protein kinase domain 267 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02844 407 PANTHER FLIPPASE KINASE 1-RELATED 31 390 - -
Pste1g02844 407 SMART serkin_6 40 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02844 407 FunFam serine/threonine-protein kinase D6PK-like 265 388 - -
Pste1g02844 407 SUPERFAMILY Protein kinase-like (PK-like) 15 392 IPR011009 -
Pste1g02844 407 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Pste1g02844 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Pste1g02844 407 ProSiteProfiles Protein kinase domain profile. 40 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02844 Pste-Chr1 12008911 12012452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02844 42 381 AGC Kinase Gene Family AT3G44610 68.362 7.22e-174 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste1g02844 Pkinase 1.1e-32 CL0016