Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02842 GAATGTCTCCTCCCTACGTAGCACATCGCAACAGGTGTGAAACAAAGATTTGAGGACACTGGGAGGGAATAATGAACGTCATTAATTTACGATTTTGGCACTGTTCCCAATTCCTCCAGTTACCAAAGGCCGTGTTCCAAGTTCCTTCTTCATCGCAAACTCTAAAGTTAAGTTTCAGAAACCCGACAACCCCTTTTGCCATTTCCTACAAAACCCGCTTCATTTCTCCAATTCGCGCGTCCATGGCCTCACCCTCCGTCACAGACACTCAAATGAAGCCATTTTCCGTTCTCTTCGTCTGCCTCGGCAATATCTGCCGCAGTCCTGCTGCTGAAGGAGTTTTCACTGATCTCGTCAAGAAAAGGGGCCTCAATTCCAACTTCAAAATCGATTCTGCTGGCACCATCAATTACCACGAGGGGAATGAAGCGGACCCGAGAATGAGAGCTGCTTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCGAGGCCAATCAAGCCCTCTGATTTTGTTGACTTTGACCTCATTCTTGCTATGGACAAACAGAACAGAGAGGACATATTGGAGGCCTTTAATAAATGGAAAGATAGACATTCTTTACCGGATGGTGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGAGGAAAGTGAAGTTCCCGATCCTTATTACGGTGGACCAAAGGGGTTTGAGAAGATGCTTGTGGATCATTACTTGAAACCATTTTGGCAGAACATATACAAGAATCCTAATACCTTTATTAATGGCCAGAAGATCCAACCCTGTGAATCGTCCCACTGTGGAGCCAAACTCCGCCTCCACACGCAACTTCTTTATGCGATGTTCTCGGCGCGTGTCGTCCTCATGCTGTTGTCTGGTTATCGGAGGAACTTTGTGCCACTGCAGTTCGACTCATCGTCCTCTCTAGTTCCAGTTTCAACCTTCATTTTGGCCTTCCACCATAGTTGA 983 0.4568 MNVINLRFWHCSQFLQLPKAVFQVPSSSQTLKLSFRNPTTPFAISYKTRFISPIRASMASPSVTDTQMKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGLNSNFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIKPSDFVDFDLILAMDKQNREDILEAFNKWKDRHSLPDGAHKKVKLMCSYCKKHEESEVPDPYYGGPKGFEKMLVDHYLKPFWQNIYKNPNTFINGQKIQPCESSHCGAKLRLHTQLLYAMFSARVVLMLLSGYRRNFVPLQFDSSSSLVPVSTFILAFHHS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02842 303 Gene3D - 55 228 - -
Pste1g02842 303 SUPERFAMILY Phosphotyrosine protein phosphatases I 68 215 IPR036196 -
Pste1g02842 303 Pfam Low molecular weight phosphotyrosine protein phosphatase 73 215 IPR023485 -
Pste1g02842 303 CDD LMWPTP 72 215 - -
Pste1g02842 303 PRINTS LMW phosphotyrosine protein phosphatase signature 200 215 IPR017867 GO:0004725|GO:0006470
Pste1g02842 303 PRINTS LMW phosphotyrosine protein phosphatase signature 116 132 IPR017867 GO:0004725|GO:0006470
Pste1g02842 303 PRINTS LMW phosphotyrosine protein phosphatase signature 73 90 IPR017867 GO:0004725|GO:0006470
Pste1g02842 303 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 35 215 - -
Pste1g02842 303 SMART LMWPc_2 71 226 IPR023485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02842 Pste-Chr1 12001260 12005605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02842 34 215 Protein tyrosine phosphatase (PTP) family AT3G44620 59.524 1.52e-78 238