Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02836 TTTGATTTGATATTGAGGACGGAGAGAGAAAGGGAGGAATGGCGACAGTAACTAGAAAGCGTAGCAACGGAGAGCGAGCGAAGGTAATAGTGATAACCGGCCCCAGTGGTTCGGGGAAGTCGAAGCTTGCCGTTGATTTGGCCTCTGACTTCCCCGTCGAAGTCATCAACGCCGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCACAAACAAACTCCCTCTTTCTCACCAAAACGGCGTGCCGCATCATCTCTTGGGTACTGTATGCCCCAACGTCGAATTCACTGCTAAAGCCTTTCGGGATTCCGCTATTCCCATTATTCATGACATATTGGCTCGTAACCACTTGCCTGTGATAGTTGGGGGCACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTTGATGATTCTCCTCAAGACGTGGATGGAAGCTGTTTTGGTGAACCACCTTGGTCTGATAACAGTTTCATTGCTGAAAATGACGGTTCAAACAATAGTTATGACCTGCTTAAGGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATTAGTTTGTACACTCGCACAAGTGTTCTTCCAAGCAAATTTTTTCAGGGAAAGGCAGCAGAGGTTTGTTTTCATCTTTGGCAATCACTGATTGACAGGAAAATCAATATGATCTCTTTTCCCTTTGTTCATGCATGCTTTGATTTATGGTCTTGTTTAATTGATTGCTTCCTTGATTCACTAATAATCCTTCCTTCCTATACCCATTTTATTCTCCTATTGGTGTGGGCATCAAGTGGATTACAAATAGACGAAGGATGGCAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGTTTTATATCTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGGATGAGGGATTACTCAATGAAGTCTATGATGTTTATAATTTGAATGCAGATTATACTAGAGGTTTGCGGCAGGCCATTGGTGTTCGTGAATTTGAGCATCTTCTTAGAACTTGTGTTGTCAGAGAGATGTATGCCAGAGAGAGGGAATTGACTGAAGGATCTGCCATAGAAAAGGGAGAGTCGTTATTTACGTGTAATTTGATGGAGTTTGTGAGATCTTCCTCTGATACTGAATCCACAGTTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGCTTAATACTCGGAGACTTGTTCGCCGTCAGGTATGCAAGGAAGCTGAAAATGTCATTTTTCTGATTAATCTCACTATAGAAAATTGCCAGTACCACTAA 1331 0.4185 MATVTRKRSNGERAKVIVITGPSGSGKSKLAVDLASDFPVEVINADSMQVYRGLDVLTNKLPLSHQNGVPHHLLGTVCPNVEFTAKAFRDSAIPIIHDILARNHLPVIVGGTNYYIQALVSPFLLDDSPQDVDGSCFGEPPWSDNSFIAENDGSNNSYDLLKDIDPVAANRIHPNNHRKINQYISLYTRTSVLPSKFFQGKAAEVCFHLWQSLIDRKINMISFPFVHACFDLWSCLIDCFLDSLIILPSYTHFILLLVWASSGLQIDEGWQKWGQVDNLRYDCCFISVDASLPVLDRYVEQRVDCMMDEGLLNEVYDVYNLNADYTRGLRQAIGVREFEHLLRTCVVREMYARERELTEGSAIEKGESLFTCNLMEFVRSSSDTESTVLLEEAIEKVKLNTRRLVRRQVCKEAENVIFLINLTIENCQYH 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02836 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 121 IPR027417 -
Pste1g02836 430 Hamap tRNA dimethylallyltransferase [miaA]. 16 425 IPR018022 GO:0008033
Pste1g02836 430 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 14 412 IPR039657 -
Pste1g02836 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 320 IPR027417 -
Pste1g02836 430 Gene3D - 13 417 IPR027417 -
Pste1g02836 430 Gene3D - 144 201 - -
Pste1g02836 430 Pfam IPP transferase 262 409 - -
Pste1g02836 430 Pfam IPP transferase 49 203 - -
Pste1g02836 430 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 16 214 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02836 Pste-Chr1 11967101 11969206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02836 19 401 C2H2 Transcription Factor Family AT2G27760 43.152 1.50e-95 293