Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02803 GCGGTACAGAAAAGTCACAGATATAGTAAGGTTTGATCCATTGGGTCATGACTCATGAAAGAGGAAAATTCAAGACTAAAATATAACCCAGCAGACACAAAAATCACGTTGCCGGGTTTCTCTTTGTGTGTGTCTCTCTCTGTCCTTCCTCGTAACTCTTAACCCACACCCCAACACTTTTATTTGTTCTTTTCGTCCTCAATTCATTACTATCCTTTTTGATGCTTTCCTTTCACTGAAGATCATCCTCACCTTTTTATTGGTCACTTGTTTATTAATCTTTCTGGTCAAGTGTCGGATTTTGTTGTTTACTCTGTCTCTGGTCTTCGGGTTCTGGGCATGGAATTATTTGTAAGATTAGAAGATGGCAGAGCTGCGCCTCCTTAATTCTTAATCCCTGCTGCTTTAATTAACAACGTTGTGTTTGAAGGGACAACAAAACGTCTTCTCTTGGAATTCTTTCCATCTCTAGGACATTCTCATAATGAGAACTGATATTGGTGAAGGGGAGGCGTTAACAAATCCTCGCTCCTTTAAGGTGCATAGTAAAATCTGCATAGAACTCAAAAAAATAGTGGATGGTATCTCAATAATAGTTCCAGACATAGAGGCAGCACGGCCAGGATTCTCTTCAGGAATAGAGTCTCTGTGTTTGCTGAACAATGCAATTGAAAAAGCCAAACTACTTCTACAACATTGCTCCGAATGCAGCAAACTCTACTTGGCAATGACAGGGGAAACAGTACTCTTAAGATGCCTAAAGGCAACAAGATCATTAGAGAAAAGCTTAATCCAAATTCAGGATATGGTTCCTGTTATGTTGGCTGTAAAGGTGTCTAGAATAATACATGATCTTGAGTGTACGAGATTTGTTCTGGACCCTGATGAAGAAGAGGCTGGGAGGGTTATGGGAGAGTTGCTTAGTCTAACCTTGGACTCAGTTGATGCGTCTGAAGTTAACGCCCTTCAGTTTGCAGCGTCTCGACTGAATATAGCAACCCCAAAGGCCATCATAATGGAGCAACGATCTATCAGGAATTTGCTACAGAAACTTGGACCAAATGACCTGAAAAAGCAGAAAATACTGAAATATCTTCTGCATCTACTGAAAAAGCATGGAAAGCTCATGGTCGGAGAATATGTGGAGAATAAGGCCTATCCTCGTTCTGAAGAACAAGCTTCAACAGAGAACTCTAGTCATGATTCTCTACGAGGCCATCATGTTGAGTCATGCCAAAGATTGAACTATGGTCAGTATATTACTCAGAACAGTGAGTTGGGTGGAATTGCACCCCCTGAGGAATATAAGTGTCCAATATCCTCAAGCTTGATGCATGATCCTGTTATCATTGAGTCAGGAGTAACATATGAAAGGATGTGGATAAAAAAGTGGTTTGATGAGGGTAATGACATATGCCCCAAAACCAGAAAGAAACTAGTCAATATGGCATTAACTCCAAATGTGGCCATGAAGGGCGTAATATCAAAGTGGTGCAGAAATAATGGAGTCTCCATTCCAGACCCTAGAAAGAAAGCAGAAGATATCCACGGATGGGAAGCTTCAAACACTTCCATTAACAGTATAGGAAGTTATTTCAATGATTTCAGCTCGCCAGTGGATCTTAGCAACATGTCACTTGGATCATTGGATATTAGTTTTAGTTCAGATGTCTCACATAGTAAGACCACTCGTGGCTCAAATTTGATGCCGACCAAGACCAGTGACAATTCTCACAAACACGAAGTTCATACAGAGATACATGATACAGATTTGATGCTCTTGCCTCAGCTCTGTGATCTTCATTGGGATTCTCAATGCAATGTCATTCAAGATTTGAAAGATCATTTGAAAAGCAATTGCCAAGCTTTTGTTTCTGTATCAGCAGAGAATTTCGTGGAACCACTTGTCAAATTTCTGACCAATGCATATGATCTGCGTGATGTTGAAGCGCTGAGAGCTGGAACCCAGCTTCTGTTGGACTTTGTGAAAAACTGCAGGCACGATTTCTTTTTCCCTTTCTCAATTTTGTTTCTTCTAAATGGGAAGACTAATTTGAATGCAGATACATTCATTCTGTTGGCAAGTTTTCTTGATTCAGAAGTGATAGAAGAAATTCTTGCCATTATGGAAGAACTGTCAGGAATTGGGTTTAGTAAAGTTAAAATTGCAGCATCTAGTGCTCTCACTTCTGTTGTAAACATACTTGATTCTGATAACAAAGGTTTCCAACAACAAGCTATTATAATTCTGTACAATTTGTCCTTCAGTTGTGAAGTTTGGCTCAGCATGGTATCTCTCGGGTGCATCCCAAAATTGATGCCATTTTTTAAAAACAGGGCCCTTTTGAGATACTGTATATGTATATTGAAAAATCTATGTGATACTGAAGAGGGTAGGAATTCAGTTGCTGAAACAAAGGGATGCATATCTTCTGTTGCTGAAATACTTGAGGCAGATGCAGGCAATAATGAGGAACAAGAACATGCACTGGCTGTTCTAGTCTCTCTATGCTCTCAACATGTGGATTATTGTAAGTTGGTAATGCATGAGCATGAGGATATCATAACTAATCTTTTCTATATCTCCCAGAATGGAAATGATAAAGGAAAGGTAAGTGCAATGGAATTGTTCCATCTTTTGCAAGATGTTAAATTAGTTGAGAATGAAGCTTGCCCTGAACCAAAAATCAGCAACTCTTCTCTAGATTCTGGCAGTCACCATGAAGAAAATAAACCATCAAAGAAATCCACGTTTCTGAAGAAACTGTCACCATTCTCTAAGTCCAGTTCACGTGCATCAAAAACCAAAAGATGAAAATGAATTCCTCTGCATTTGAACCCACAATGACCTTGTGATCTTATTATCAGAACATTAGATCACTTGCATATAAGTTCGGTACGTGGGTTTTGCCTTTCTACCACTTGGCATTTTTAGTTTTAAAGATTCGCTCGCAAAGCATCTGCTACTTAATTTTGCAGTGTAACAGCAGGTAGTATGATGATGTATAGCTGTGCCTATGATTATGATATATTCTTTTGTGTTTTGACATTCAAATTTAGGGCTTTGTTAATTGTTAAGATAGTACACAGTTGTGTGATTTTCCTTTTACCTCCTGTCAACATTACCAGGAGACCAATTACATATTTCTTGGTTATTGTTGTGTATATATATATTGAACACTTCAAAGTAAATTATTAGAGTTTGATATACTACTGTAAAATAGATATTAGTGTAATGAAGGTGTTTGTTAATATTTCAATACATTTTTTTC 3272 0.3842 MRTDIGEGEALTNPRSFKVHSKICIELKKIVDGISIIVPDIEAARPGFSSGIESLCLLNNAIEKAKLLLQHCSECSKLYLAMTGETVLLRCLKATRSLEKSLIQIQDMVPVMLAVKVSRIIHDLECTRFVLDPDEEEAGRVMGELLSLTLDSVDASEVNALQFAASRLNIATPKAIIMEQRSIRNLLQKLGPNDLKKQKILKYLLHLLKKHGKLMVGEYVENKAYPRSEEQASTENSSHDSLRGHHVESCQRLNYGQYITQNSELGGIAPPEEYKCPISSSLMHDPVIIESGVTYERMWIKKWFDEGNDICPKTRKKLVNMALTPNVAMKGVISKWCRNNGVSIPDPRKKAEDIHGWEASNTSINSIGSYFNDFSSPVDLSNMSLGSLDISFSSDVSHSKTTRGSNLMPTKTSDNSHKHEVHTEIHDTDLMLLPQLCDLHWDSQCNVIQDLKDHLKSNCQAFVSVSAENFVEPLVKFLTNAYDLRDVEALRAGTQLLLDFVKNCRHDFFFPFSILFLLNGKTNLNADTFILLASFLDSEVIEEILAIMEELSGIGFSKVKIAASSALTSVVNILDSDNKGFQQQAIIILYNLSFSCEVWLSMVSLGCIPKLMPFFKNRALLRYCICILKNLCDTEEGRNSVAETKGCISSVAEILEADAGNNEEQEHALAVLVSLCSQHVDYCKLVMHEHEDIITNLFYISQNGNDKGKVSAMELFHLLQDVKLVENEACPEPKISNSSLDSGSHHEENKPSKKSTFLKKLSPFSKSSSRASKTKR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02803 776 MobiDBLite consensus disorder prediction 741 755 - -
Pste1g02803 776 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 344 IPR013083 -
Pste1g02803 776 SMART Ubox_2 273 336 IPR003613 GO:0004842|GO:0016567
Pste1g02803 776 Gene3D - 432 732 IPR011989 -
Pste1g02803 776 Pfam U-box domain 271 340 IPR003613 GO:0004842|GO:0016567
Pste1g02803 776 SUPERFAMILY ARM repeat 432 719 IPR016024 -
Pste1g02803 776 PANTHER U BOX DOMAIN-CONTAINING 24 724 - -
Pste1g02803 776 MobiDBLite consensus disorder prediction 733 776 - -
Pste1g02803 776 ProSiteProfiles U-box domain profile. 269 343 IPR003613 GO:0004842|GO:0016567
Pste1g02803 776 SUPERFAMILY RING/U-box 258 346 - -
Pste1g02803 776 CDD RING-Ubox_PUB 271 318 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02803 Pste-Chr1 11748549 11755732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02803 1 722 U-box Gene Family AT4G36550 33.653 4.68e-115 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02803 1 11748549 11755732 Pste1g02803 1 11748549 11755732 ECH
Pste7g01507 7 13807943 13813142 Pste1g02803 1 11748549 11755732 ECH
Pste1g02803 1 11748549 11755732 Pste7g01507 7 13807943 13813142 PCT