Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02792 CTCGGTTAATCTCCACCGTTCCATCTCTTTCTTTCTCTAACCTTCTCTCTCTAGAAAGTTTATTCCGAATTTTGATTCTGCGCTCAGATTAGATCCCATAATTTTTCATTGTTGGATCCGTTTTCCGGTCCATGCTTTGACAAAACGCCATTCCCTATATATTCCTCCTCATCCTCTTCCTCAAACTGTTTTCCCTCTCACACCTACAACAAAACTCTTAACTCACCATCACACAGAGAAGAAAAATTCGATTTTTAAATGCAATTCGCTGAGAAAATGCTACCCCTCAAAATGGGGTTTCGTGAGTACATCGAAGCATTGGAGGAAGAAAGGAGAAAAATTCAAGTTTTCCCCAAAGAGCTTCCTTTGTCATTAGAGCTTATCACCCAAGCTATTGAGGCGTGTAGGCAGCAATTATCTGGAACGGTTGCAGAGTACAACTTGAATGGCCAATCGGAGTGTTCGGAACAGACATCAACGGATGAAGGACCTGTTTTTGAGGAGTTTATTCCGATAAAGAAAAGGGCATCTCATGATTCTGTTGAAGTAGAAGACGAAGATGGTGATGATGAACAGCATTCACATAAGCAGAAAAAAATCACCACTGATAAAAAGAAATCAGATTGGCTCAGATCCGTTCAGTTGTGGAATCCCAATCCCCCTTCTTCCAAAGAGGATGTTGTGCCTAGAAAAGCAAATGTTGTGGAAGTGAAGAGAAGCGGTGGAGCTTTTCAACCGTTCCAAAGAGAGGAAAAAAGTGGTGTTGCAACATCAACAATTACTAAAGCACCCTCTTCTCCACCAGTGCCAGCTACAAGTTCTACAGGACCAGTGAGAGTAGAAAGCAAAAAAGATGAAAAGGGACAGGCTCAGAGGAAACAACGCAGGTGTTGGTCACAGGAATTGCACAAGCGATTCTTGCAGGCTCTTCAACAACTTGGAGGTGCAGATTCTGCCACCCCCAAACAAATACGGGAGCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTTCACACTAGAAGAAGCCCCATGATCCACAACAATGGTAGTTCACAAGCAGGTCCGTTGTTTCTTGTGGGGAACATTTTTGTGCAGCCATCAGAATATGGTGCAGTAGCTACCTCAACAGCATCTGGAGGAGAATTGACCACAGTTACTGGTCCAACTGGAATATATGCACCTGTGGCTGCACACCCTCCAGCTGTCACCCACACACCAATAATGAAGCAGCATTCACACTCTCAGGAAGGGGCCAATCATAGTGTTCATTCAAACTCTTCACCTGCCTCATCTTCCTCCACACACACCTTCACTACTTCACCTGCCCCTTGATTTTCATCCTGTAAAAAATTTTTTGTAACCATATTGTAGAAGAATTAAAGTCTATGTCATATTGTTATTCTCACATCTTTTTTACCTTCTCTCCTTCCCAATGTTTTGTATTTTTTTTACGAGGAGTTTTAGGAGAATTATTTCATGAACTCTCTTTCTTTATAATTTATAGGAAACCACCAATTTTAGTAGGTTTCCACAGGGAGGTCTTATAAAAGAGAGTTTTTGAGAGAGATTCTTTTACCATTTCTTTCTCGGG 1621 0.417 MQFAEKMLPLKMGFREYIEALEEERRKIQVFPKELPLSLELITQAIEACRQQLSGTVAEYNLNGQSECSEQTSTDEGPVFEEFIPIKKRASHDSVEVEDEDGDDEQHSHKQKKITTDKKKSDWLRSVQLWNPNPPSSKEDVVPRKANVVEVKRSGGAFQPFQREEKSGVATSTITKAPSSPPVPATSSTGPVRVESKKDEKGQAQRKQRRCWSQELHKRFLQALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPMIHNNGSSQAGPLFLVGNIFVQPSEYGAVATSTASGGELTTVTGPTGIYAPVAAHPPAVTHTPIMKQHSHSQEGANHSVHSNSSPASSSSTHTFTTSPAP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02792 367 MobiDBLite consensus disorder prediction 90 119 - -
Pste1g02792 367 MobiDBLite consensus disorder prediction 193 211 - -
Pste1g02792 367 FunFam Myb family transcription factor 206 264 - -
Pste1g02792 367 SUPERFAMILY Homeodomain-like 205 265 IPR009057 -
Pste1g02792 367 Gene3D - 206 264 - -
Pste1g02792 367 MobiDBLite consensus disorder prediction 333 367 - -
Pste1g02792 367 MobiDBLite consensus disorder prediction 156 211 - -
Pste1g02792 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 207 262 IPR006447 GO:0003677
Pste1g02792 367 MobiDBLite consensus disorder prediction 103 119 - -
Pste1g02792 367 MobiDBLite consensus disorder prediction 165 192 - -
Pste1g02792 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 343 IPR044787 GO:0003700|GO:0006355
Pste1g02792 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 264 IPR017930 -
Pste1g02792 367 Pfam Myb-like DNA-binding domain 209 258 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02792 Pste-Chr1 11602699 11605991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02792 1 321 G2-like Transcription Factor Family AT1G68670 49.118 1.01e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g02792 Myb_DNA-binding 6.8e-06 CL0123