Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02791 GTCTACTTTATCTCTCTCTCTCCTATAACACAAGCATTGGGTCCCTCTTTTAATAATCATCCTTTAACCTTTCTCCCCTGAACCCCTTCACTATATATATATATCTCCATTCGCAATTAACGACAAGGTGGACAGCAGGTGCTGACCGGTATTTCGACATCTTATTAGCCCACAAAGCTAACAAACAGAAACAACGCCCCCTACTCCATAGTCCGTACCATTAAGCTCTCCCGTGCCCAGTTTTAATCTGCTAGCACATCATTTTTTTTCTCACTCACTTTCCCTATTAATTCATAGCTCTTGTTCAATTGGTTTGGAATTCCAGTGGCGAAGGATGAATAGGTATTGCAGTGGCTCCGAGGGGCAGGAGATGGGAGGGTGTAGGTGTGGTATGTTTCACAGCCAAGGAAGTTCCTTCTCCATGTGCAACAACAAACCACCCTACGACATCTATGATTATTCCTCTTCAGTGGACTGCACCCTCTCCCTGGGAACCCCATCAACCCGCTTCACACAAGACCAAGAAAACCGAACCCGCAACCCTGTTTCTAACTTCTACTGGGATATACTACAAGTACAATCCAAACACAACCCTCAATCCCATACCCCAACCACCGACACTCTCCAGGCTCGTCGCTGCGCCAATTGTGACACAACTTCAACTCCCCTTTGGAGAAATGGACCCCGCGGCCCCAAGTCGCTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAGGAGAGAAGAGCGAGTGCTGCTGTTGCCGCACCGGCAGCGGGTTCTGCCGTAATGGAATCGGCCCAGCTCTACAATAACCCATGCTACGGTCACCCGCAGAGTCAAAAGATGCGCTTCTTCTCGTCGGGGCTGGGGAACGAGTTCCGTTTCGTGGATGAAGGCCATCCAGACGTCCATAACGCTATTCCGTTTCTCTCGTGGAGACTCAACGTCACTGACAGAACCAGCATCCTTCACGATTTCACCATATGAAACATCCAAACTGAAAAATAAGCATATACCAGTAATAATCACACAAGATTAAAAAGGACCTATCTAGCGTCAAGAACCACAGGCAGTTACACGTCAACGTTTTACTATGATGTTTTTTATTGCCATGGTTATGGTCTACTCGATATTATGTTTCTTTTCTTACTTTTTTAGCTTTTTCCTTTTGTTTTCTTCTTCTTCTCCCTCTTGCTTGCCTGTGACCTTGGGATAATATTCTATATTCTTAGCTTGCTTTTTCTTTGGACCCATTTCTTTAACTTTCTCTTTCAGTTACTTATAAAC 1288 0.4542 MNRYCSGSEGQEMGGCRCGMFHSQGSSFSMCNNKPPYDIYDYSSSVDCTLSLGTPSTRFTQDQENRTRNPVSNFYWDILQVQSKHNPQSHTPTTDTLQARRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERRASAAVAAPAAGSAVMESAQLYNNPCYGHPQSQKMRFFSSGLGNEFRFVDEGHPDVHNAIPFLSWRLNVTDRTSILHDFTI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02791 217 ProSiteProfiles GATA-type zinc finger domain profile. 96 132 IPR000679 GO:0006355|GO:0043565
Pste1g02791 217 SMART GATA_3 96 149 IPR000679 GO:0006355|GO:0043565
Pste1g02791 217 Pfam GATA zinc finger 102 136 IPR000679 GO:0006355|GO:0043565
Pste1g02791 217 Gene3D - 97 156 IPR013088 GO:0006355|GO:0008270
Pste1g02791 217 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 99 137 - -
Pste1g02791 217 CDD ZnF_GATA 101 133 IPR000679 GO:0006355|GO:0043565
Pste1g02791 217 PANTHER GATA TRANSCRIPTION FACTOR 18 14 216 IPR044272 GO:0003700|GO:0009908
Pste1g02791 217 ProSitePatterns GATA-type zinc finger domain. 102 127 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02791 Pste-Chr1 11584935 11586307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02791 18 216 C2C2-Gata Transcription Factor Family AT3G50870 39.209 1.64e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste1g02791 GATA 5.7e-18 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02791 1 11584935 11586307 Pste1g02791 1 11584935 11586307 ECH
Pste1g02791 1 11584935 11586307 Pste7g01473 7 13534749 13535791 PCT