Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02773 ATTTGACTTAGAGAGAGGAGAGGTGGTGGAAGTTCCCATTTTAAGCAGAGAAGTGTCCCTGGATCAGTTGGGTTTGATTTGCCGGTAAAGTTCGAAAACCCTAACTGCTGATGGAGAGGAGTGATGGTTACAGTTCGGAGGAGGAATGCATGGAGGATTATAGGCGTGGAGGCTACCATGCCGTTCTCCTTGGCGACACTTTCCACAATGCCCGTTACGTCGTCCAATCCAAACTCGGTTGGGGCCACTTCTCCACCGTCTGGCTCGCTTGGGACACTCTCTATTCGCGTTATGTGGCCCTTAAAATTCAGAAGAGTGCGCAGCATTACACTGAAGCTGCAATGGATGAAATAAAAATTCTCAAACAAATAGCTGAGGGGGATCTGGACGACAAGAAGTGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCAGGGCCTAATGGACAGCATGTGTGTTTGGTTTTTGAATTCCTGGGTGACAATCTTCTCACCCTTATCAAATATAGTGACTATCGCGGGGTTCCTCTTCCCATGGTGAAAGAGATCTGTTTTCATATTTTGGTGGGGTTGGATTACTTACATCGTGAGCTTTCTGTCATTCACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTGTCACTGATAAATTCATCTAAAGATCCGAGGAAATCAGGCGCTCCACTCATCCTTCCAAACAGCAAGGATAAGGTTACATCCAATAATGGGACTAACCAAGACACTAAAATTTTGAATGGTGATCTGATGAAGAACCAGAAAAAGAGAATGCAGAGGAAGGCTAAGGTTGCTCAAGGCTGTGTTGAGAAGGAAACTTCAGAGGAAGCTAAGGATTGTAAAGGACTTGAGCAAGAAGATTGCCGCAATGATGTGAGATCGAATGTGGAATCTGTTGAAGATAAACCAGATAGTTCTTTCAGTAAAGGTGCATCTACAAAGACTTCTGAAAAGGATGTTTCACAAGGAAGTCATAATCAAACGACAGGCAACCGATCCATGAGAAAGAAGTTGCTGGAAGCTGTTGACCTTAAGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTCACAAACAATTCACAAATGATATTCAGACAAGGCAATACAGGTGTCCTGAGGTTCTTCTTGGATCCAAGTACTCAACTCCAGCAGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTACGATAGAGATGAGGATGAGATAGAAGCTTTAGTTTCCGGATCATCTGGCATTGATGATGGAGCTTCTTGGGATGATGTCTCCGAAGGTATGAATGTTATCTGCTCTCTTGCACTAGGTGGTCGCTATTCCCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACGTCGACAATTTGCGATTCTGGCCAATGGATAAGGTGCTGATGGAGAAGTATAATTTCAGTGAGCAAGACACAAAAGACCTGGTTGACTTCCTTGTTCCAATACTTGATTTTGTTCCTGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGTCATCCATGGATGAGTGCAGGCCCCCGGACTCTTGAGCCCTCAATAACTACCGCACAACCTGATGCCATTAATGAAGAATTATCTGAAAGGAAGAAGAGGGAAACGGCAGTGGAAATTGGTTTGAGGAATGTCACCATTAAGGGAATTTATGAGCCTCTGAAAGACTCCCAACCTCTAAAGTCATCCAAATAGATACTTGACCGGGTAAGCATATGCAACCTGTTTTCTTTTTGGGGGCAACTCTTCCTTGGAGCTTGATATCTATGGAATTGTTTGCGTGAGGCATTATATATACAATGCACGCCAGACTAGACAAGTTTGTGACTAGCGAAGCATTTCCTGGGTCAAAGACAGGCGCTTTATCTTTGCTGTATTATTGTAACCTTCTTTCACCATTACTGGTATTACAGGTGTAGCTTCAAATTCAATTGATCAAGTGTGCTAAGTTATATAAACTATGGTTTTTTTGGTGCTAGGAAATTCTTCCTACACTAAATAATATTCACCGGAAGTATTCCAAAAGGAGAGGAGAAAGGGGTATTTTAGAAGATAAAATCGATTAGAAAACAATTTTTCATAGAGAAGGTGCATGTATTTTAATCGCAACTCAATCATTGATTCTTTAATCCATGGTTGTAATTATACTTACT 2215 0.4226 MERSDGYSSEEECMEDYRRGGYHAVLLGDTFHNARYVVQSKLGWGHFSTVWLAWDTLYSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCLVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINSSKDPRKSGAPLILPNSKDKVTSNNGTNQDTKILNGDLMKNQKKRMQRKAKVAQGCVEKETSEEAKDCKGLEQEDCRNDVRSNVESVEDKPDSSFSKGASTKTSEKDVSQGSHNQTTGNRSMRKKLLEAVDLKCKLVDFGSACWTHKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDEIEALVSGSSGIDDGASWDDVSEGMNVICSLALGGRYSREFFNRHGDLRHVDNLRFWPMDKVLMEKYNFSEQDTKDLVDFLVPILDFVPEKRPTAAQCLSHPWMSAGPRTLEPSITTAQPDAINEELSERKKRETAVEIGLRNVTIKGIYEPLKDSQPLKSSK 548
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02773 548 MobiDBLite consensus disorder prediction 260 302 - -
Pste1g02773 548 CDD STKc_SRPK 25 489 - -
Pste1g02773 548 Pfam Protein kinase domain 311 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02773 548 Pfam Protein kinase domain 36 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02773 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pste1g02773 548 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Pste1g02773 548 ProSiteProfiles Protein kinase domain profile. 36 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02773 548 FunFam CMGC/SRPK protein kinase 22 121 - -
Pste1g02773 548 SUPERFAMILY Protein kinase-like (PK-like) 31 499 IPR011009 -
Pste1g02773 548 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 509 - -
Pste1g02773 548 FunFam Serine/threonine-protein kinase SRPK-like protein 304 489 - -
Pste1g02773 548 SMART serkin_6 36 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02773 548 Gene3D Transferase(Phosphotransferase) domain 1 308 489 - -
Pste1g02773 548 MobiDBLite consensus disorder prediction 197 216 - -
Pste1g02773 548 MobiDBLite consensus disorder prediction 273 302 - -
Pste1g02773 548 MobiDBLite consensus disorder prediction 184 225 - -
Pste1g02773 548 Gene3D Transferase(Phosphotransferase) domain 1 90 178 - -
Pste1g02773 548 Gene3D Phosphorylase Kinase; domain 1 22 121 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g02773 Pste-Chr1 11484892 11488329 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02773 7 533 EF-hand Containing Proteins AT5G22840 60.374 0.0 633
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pste1g02773 Pkinase 3e-20 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03111 3 23914553 23920558 Pste1g02773 1 11484892 11488329 PCT