Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02766 CAAGCACCGGTTGGTTTCCTTTCCCTACAAAAAGGCCACTACTCACCACTCGCTCCCACCATTCTAACCACCTACGTACGCCGCTTTCTATCCTATAAACAAATTTGAACATCCATTTTTCCAAGCCATCATTTAACAAAACAATGTCACGACGCAGTGGCCACAAGCAACCCGATTACCGCGGTCCCGGACAGCCTGCGCCCTCTCCCGCCGGAAGAGGCGCCGCCCGTGGCCGTGGCCGTGGCCGCGGCCGCGGGGAATCTCCCTCTCCTCTCAATGCACCATCATCAGCGCCTTCTCCGCTGGTTAATGCACCTTCGCCTCGTCCTGCCGCTCCGTCTGCACATTCTCCGGCTCCGGCTCCGGTTCCGGCTCCGGTTCCGGCTCCAGTTCCGACGCCGGAGTCTTTGTGTTCAGTGGTGGAGAAGCAACTCACACTGCAACCGGCGGCGCCGTCGTCATCGAAGGCATACAGGTTCCCGGACCGACCAGGGTACGGTCGAATGGGCAAAAAAATCCAAGTCCGCGCGAATCATTTCCTTGTCAAATTCGCGGAACATGAAGTGTGTCACTATGATGTGTCTATCAATCCAGAGATTACTTTGAAGAAGGTTTGCAGAGATGTTATTAGGTTATTGGTGGAAGAGCACCGTGAAAAGGTGTTAGGAAACCGTATACCTGCCTACGATGGGCGAAAGAGTCTTTACACTGCTGGACCTTTGCCCTTCGAATCCAAGGAATTTGTGATCAAGTTAGGGGACGATGATGCACCGGCCTCCACCTCTTCTTCCTCTTCTCCTGCTGTTGTCAGAAAACCACGTGAACGCCAGTTTAGGGTTACAATCCGTTTTGCTTCCAGGCCCGACCTTAACCACCTCCTTCAATTTCTCAATCGCCGTCAACTAGATTGTCCTCAAGAAACTATTCAGGCTCTTGATGTTGTTCTGCGTGCCACACCATCTGATACCTATGATGTCGTCGGAAGATCATTTTTTTCACCTGTTTTTGGGGATCCTGGACCGCTTGGTAGTGGGACTGAATACTGGAGGGGATACTATCAGAGTCTTCGCCCAACTCAGATGGGGCTGTCTCTCAATATTGGCCTTTGTCTGATCAGGATCGTGTCAAGGTATTTATCATTTATGTTGTCAAATGTTCTTATTGTGCCGCCCGCCTTTTGCTGCAAGTCTATTATTAATGATTTTGCCAATACGAACAAGATTAAGAGAGCTTTAAGAGGAGTGAAGGTACAGGTTAATCATGGAACAAACATCAGGCGATACAAAATTACTGGAGTTACAAAAGAACCACTCAGAGATTTGAGGTTTACTCTTGATGACAATAAAACCAAAACATTAGTTGTCCAATATTTTCAAGAGAAATACAATATCAAGATGAAGTATTTGCTTCTTCCTGCTATCCAAGCTGGTAGTGAGACTAAACCAATTTATTTGCCTATGGAGCTCTGTGAGATTGTTGGTGGGCAGAGATATTCAAAGAGATTGAATGAGGATCAAGTGACTAATCTTCTAAGGGCTACTTGTCAGCGTCCTCATGAGAGAGAAAACAATATAAAGAAGGTTGTGAGGCAGAGCAAATTCAACACAGACAAATTTGCACGTCACTTTGGACTTCAAGTGAGGGAGGAACTAGCATTGATTGATGCTCGTGTTTTACCTCCTCCAGTGCTTAAATATCATGACACAGGTGCAGAATCACATGTTGAACCTCGAATGGGTCAGTGGAATATGATTAATAAGAAAATGTTTGAAGGTGCTGCTGTTTTGTATTGGACTTGCCTCAACTTCTCTAAAATCAACAGAGATTTGTTAGTTAATTTTTGTCAAAGTTTGGTTGATATGTGCAACAGCAAAGGAATGAAATTTCACCGTGAGCCTTTAGTGCCTCCAACTACTGTTCGTCCTAATGAGATCGAGAGTGCTCTTCGGAATGTGCAAAAGCAGTGTATGTCAAAATTAGCAAGCTTGAATATTCAGGGACAACTACAAATGTTGATCATAATATTGCCTGAGTTCGACAAATCTTATGGAACAATAAAGCGTATATGTGAAACTGAACTAGGAATTGTATCTCAGTGTTGTCGACCGAGGCAAGTGGCAAAGATGAACAAGCAATATTTTGAAAATGTGGCCCTTAAAATGAATGTGAAGGCCGGTGGTAGAAACACGGTATTGAATGATGCAATCATGAAAAGAATCCCTCATGTGACTGATAAAGTAACATTAATCTTAGGTGCTGACGTAACACATCCACAACCAGGGGAAGACTCTAGTCCTTCCATTGCTGCAGTAGTGGCATCAATGGATTGGCCTGAGGTAACAAAATATAGAGGGATTGTTTCGGCTCAGGCACACCGTGAAGAAATAATTCAAGATCTATATAAAACTTACGAGGATCCTAAGAGGGGAAAAGTGCACGATGGAATTATCAGGGACTTGTTTCGTGCTTTCTATGCTTCCACTAAAAAGAAGCCGGATAGGATTATATTCTACAGAGATGGAGTAAGTGAGGGCCAATTCAGTCAGGTCTTACTTTACGAGATGGATGCAATAAGAAGGGCCTGTGCATCACTAGAAGAAGGCTATTGTCCCCCTGTTACTTTTGTGGTAGTTCAGAAAAGACACCACACAAGGTTATTTCCTGTAGATCATGGAAGGCGTGATCAGACGGATAAAAGTGGAAATATAATGCCAGGGACTGTCGTGGACACAACCATTTGTCACCCACGGGAGTTTGATTTTTACCTCAATAGTCATGCTGGAATTCAAGGAACTAGTCGACCAACCCATTATCATGTGTTGTTTGATGAAAATAACTTCACTGCTGACGAGTTGCAGACATTTACAAATAATTTGTGTTATACGTATGCAAGGTGTACTCGATCAGTTTCAATAGTTCCTCCTGCGTATTATGCGCATTTGGCCGCTTTCCGGGGTCGCTATTACATTGAAAATGAAATATCAGATGGTGGTTCTACAGGTGTAGGTGGAGGAGGGCCTGTTGCAAAGTTTGAGGTGAGATTGCCCGCAGTGAAGCATAATGTCCAAGATGTTATGTTTTTTTGTTGATGGATAATGTACAAGATGTCATGTGTTGCAAAGGCTTTCTTTTTTTGAATGCGATCTATCTCTACTTACTGTGGTTGGATTATCATAATTTGTTATTTTAGTAGCTGTGTTATAATGCACGTAAACTTCAGTTAGCTTTTCGGTTTATCCGTACACTTGTACCAAGATAGTTCGACGAACTTTTTGAATGCAATATAGTCCTCTTTTTTCGTTA 3303 0.4384 MSRRSGHKQPDYRGPGQPAPSPAGRGAARGRGRGRGRGESPSPLNAPSSAPSPLVNAPSPRPAAPSAHSPAPAPVPAPVPAPVPTPESLCSVVEKQLTLQPAAPSSSKAYRFPDRPGYGRMGKKIQVRANHFLVKFAEHEVCHYDVSINPEITLKKVCRDVIRLLVEEHREKVLGNRIPAYDGRKSLYTAGPLPFESKEFVIKLGDDDAPASTSSSSSPAVVRKPRERQFRVTIRFASRPDLNHLLQFLNRRQLDCPQETIQALDVVLRATPSDTYDVVGRSFFSPVFGDPGPLGSGTEYWRGYYQSLRPTQMGLSLNIGLCLIRIVSRYLSFMLSNVLIVPPAFCCKSIINDFANTNKIKRALRGVKVQVNHGTNIRRYKITGVTKEPLRDLRFTLDDNKTKTLVVQYFQEKYNIKMKYLLLPAIQAGSETKPIYLPMELCEIVGGQRYSKRLNEDQVTNLLRATCQRPHERENNIKKVVRQSKFNTDKFARHFGLQVREELALIDARVLPPPVLKYHDTGAESHVEPRMGQWNMINKKMFEGAAVLYWTCLNFSKINRDLLVNFCQSLVDMCNSKGMKFHREPLVPPTTVRPNEIESALRNVQKQCMSKLASLNIQGQLQMLIIILPEFDKSYGTIKRICETELGIVSQCCRPRQVAKMNKQYFENVALKMNVKAGGRNTVLNDAIMKRIPHVTDKVTLILGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQAHREEIIQDLYKTYEDPKRGKVHDGIIRDLFRAFYASTKKKPDRIIFYRDGVSEGQFSQVLLYEMDAIRRACASLEEGYCPPVTFVVVQKRHHTRLFPVDHGRRDQTDKSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNFTADELQTFTNNLCYTYARCTRSVSIVPPAYYAHLAAFRGRYYIENEISDGGSTGVGGGGPVAKFEVRLPAVKHNVQDVMFFC 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02766 981 SMART DUF1785_2 277 329 IPR014811 -
Pste1g02766 981 Gene3D - 510 686 - -
Pste1g02766 981 ProSiteProfiles Piwi domain profile. 623 943 IPR003165 GO:0003676
Pste1g02766 981 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 103 944 - -
Pste1g02766 981 SMART PAZ_2_a_3 336 468 IPR003100 GO:0005515
Pste1g02766 981 Pfam N-terminal domain of argonaute 123 268 IPR032474 -
Pste1g02766 981 Pfam Argonaute linker 1 domain 279 319 IPR014811 -
Pste1g02766 981 CDD Piwi_ago-like 490 942 IPR045246 -
Pste1g02766 981 Pfam Argonaute linker 2 domain 472 518 IPR032472 -
Pste1g02766 981 SUPERFAMILY PAZ domain 124 487 IPR036085 GO:0005515
Pste1g02766 981 Gene3D - 692 981 IPR036397 GO:0003676
Pste1g02766 981 Pfam Mid domain of argonaute 529 606 IPR032473 -
Pste1g02766 981 Gene3D paz domain 347 449 - -
Pste1g02766 981 Pfam Piwi domain 625 942 IPR003165 GO:0003676
Pste1g02766 981 FunFam protein argonaute 10-like 691 981 - -
Pste1g02766 981 Pfam PAZ domain 357 463 IPR003100 GO:0005515
Pste1g02766 981 MobiDBLite consensus disorder prediction 1 80 - -
Pste1g02766 981 FunFam Argonaute 10 510 685 - -
Pste1g02766 981 CDD PAZ_argonaute_like 359 445 - -
Pste1g02766 981 SMART Piwi_a_2 623 943 IPR003165 GO:0003676
Pste1g02766 981 ProSiteProfiles PAZ domain profile. 359 446 IPR003100 GO:0005515
Pste1g02766 981 MobiDBLite consensus disorder prediction 53 80 - -
Pste1g02766 981 SUPERFAMILY Ribonuclease H-like 617 943 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02766 Pste-Chr1 11451756 11457549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02766 64 981 Eukaryotic Initiation Factors Gene Family AT1G48410 54.565 0.0 1015