Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02750 ATACATTAACAATGTCTTCGGCACCTCATAACTCTTCTCCAGATAACTCCACACCTGATAATTCCACCCCTGATAACTCCACCCCAGATAACTCCACGCCTGATAATTCCACTCCTGATAACTCTGACAACTCACCACCATCACATTCGCCACCTCCATCATCGCCACCACCATCATCACCACCACCATCTTCACCGCCTCCCTCTTCACCACCACCCTCTTCCCCACCACCATCATCGCCACCTCCATCATCGCCACCTCCCTCATCACCTCCACCATCGTCACCACCTCCTTCCTCGCCGTCACCATCATCACCACCACCGTCATCACCGCCACCATCACTTTCCCCTCCAACATCAAACAATCCAACCCCTCCATCTCCCACCGGCACCTCACTGTCACCTCCGACACCCGTTTCAACACCCTCTCCACCCTCCTTTGAACCACCTTCTCCCCCACACAAATCTCCATCGTCCTCAAAACACTCTGACAGTGGCCGCGGTGGTGTTAGCGGAAGTGGGGGTAACGGTAACAGTGGCGGTGGCGGTAACAGTGGCAGTGGCAATGGCAATGGCAATGGCAATGACGATAGCAGTAAGGCCATAGTTGGAGCAGTACTTGGGGTAGGAAGCGTGCTTCTTATTTTGGTCATCGTTTGCGTTGTCTGCTCTAGAAAAAAGAAAAAGAAGAGAATGTACTATTATGGAGAGCAATCTATGGGGAAAGGGAATAATAACTATTTCAACAGTGGGCAGCACCCGAATAATTATTACGGAGGTCCACATGGGGATCATGTTGTGAGGGTACAAAATGGAATGGGTCCAGGTGGTGGCGGGTGGGGTGCACCACCACCTCCTCCGATGATGAATAGTGCTGAAATGAGCTCCAACTACTCCACGGGAGGACCCGCTTTGCCTCCTCCTTCACCAACCTTTGCTCTAGGCCTCAAAGGGGGCACCTTCACTTATGAAGAATTAGCCACAGCCACCGATGGATTTGTTGATGCAAATCTGATAGGACAGGGTGGCTTTGGTTATGTCCATAAGGGTGTGTTGCCTAATGGAAAGGAAGTGGCAGTTAAGAGTCTAAAAGCAGGTAGTGGCCAAGGAGAGAGAGAGTTCCAAGCGGAGATTGACATCATTAGTCGTGTGCATCATCGCCATCTCGTATCACTTGTTGGGTACTCTATTTCTGGTGGACAGAGAATGTTGGTCTATGAATTTATTCCCAATAAAACATTGGAATATCACCTTCATGGAAAGGGTAGGCCTACCATGGATTGGCCAACTAGAATGCGGATTGCAATCGGATCTGCTAAAGGGCTTGCTTATCTTCATGAGGACTGTCATCCTCGTATTATTCATCGTGATATCAAAGCTGCGAATGTCCTTATTGATGATAGTTTCGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCGACTCGTGTCATGGGAACTTTCGGGTACCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGACGTTTTCTCATTTGGGGTCATGCTGTTGGAACTCATAACTGGGAAGAGACCTGTTGATCATACAAATGCCATGGACGACAGCTTAGTAGACTGGGCTCGACCACTTCTGACTCGTGGCCTAGAGGAGGATGGCAACTTTGGAGAGTTAGTTGATGCATTTTTGGAGGGAAATTACAATGCTCAAGAACTGCAAAGGATGGCAGCATGTGCTGCTGCTAGCATTCGTCATTCTTCCAAGAAACGTCCAAAAATGAGCCAGATTGTAAGAATTTTGGAAGGAGACGTCTCACTGGATGACTTGAAAGATGGGATTAAGCCGGTAAACAGTTCTGTTTACAATTCTTCATCTGGGTCAGATCAGTATGATACGATGCAATACAATGCTGATTTACAAAAGTTTAGAAAGGCAGTTTTTTGCAATAGCCAGGAATTTGGCACCAGCAGTGGCTCTAGTGGTGAAGTGAGTCAGAAGCAGCAACGGCTTTAGATTGCGGAACTAATGAGATTAGCAATTCTAGTCTCAATTGCTTATAACACACGTGAAAGCAAAAGGGGAAAAAAACAACTGGGGGTTGGTGCTTTTTATTGTTTCATTGGCATGGAAAGTGAGGTCTCAATTTGTAGAGAACTGAGCTTGACGCCTTTGTTTCGGGGGGGTGTTTTATGAGGCGACAAATCAATGCGACTTGCCTCATCTTCAGTATATATTCTTTAATATGACTATCGTGTACTTCGGGATGTATAGGCAGTCATACATTTGGAATGG 2309 0.4682 MSSAPHNSSPDNSTPDNSTPDNSTPDNSTPDNSTPDNSDNSPPSHSPPPSSPPPSSPPPSSPPPSSPPPSSPPPSSPPPSSPPPSSPPPSSPPPSSPSPSSPPPSSPPPSLSPPTSNNPTPPSPTGTSLSPPTPVSTPSPPSFEPPSPPHKSPSSSKHSDSGRGGVSGSGGNGNSGGGGNSGSGNGNGNGNDDSSKAIVGAVLGVGSVLLILVIVCVVCSRKKKKKRMYYYGEQSMGKGNNNYFNSGQHPNNYYGGPHGDHVVRVQNGMGPGGGGWGAPPPPPMMNSAEMSSNYSTGGPALPPPSPTFALGLKGGTFTYEELATATDGFVDANLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYSISGGQRMLVYEFIPNKTLEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDHTNAMDDSLVDWARPLLTRGLEEDGNFGELVDAFLEGNYNAQELQRMAACAAASIRHSSKKRPKMSQIVRILEGDVSLDDLKDGIKPVNSSVYNSSSGSDQYDTMQYNADLQKFRKAVFCNSQEFGTSSGSSGEVSQKQQRL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02750 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 204 647 IPR047117 -
Pste1g02750 672 Gene3D Transferase(Phosphotransferase) domain 1 405 614 - -
Pste1g02750 672 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Pste1g02750 672 MobiDBLite consensus disorder prediction 41 152 - -
Pste1g02750 672 ProSiteProfiles Protein kinase domain profile. 329 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02750 672 Gene3D Phosphorylase Kinase; domain 1 308 404 - -
Pste1g02750 672 FunFam Proline-rich receptor-like protein kinase PERK1 405 613 - -
Pste1g02750 672 Pfam Protein tyrosine and serine/threonine kinase 334 539 IPR001245 GO:0004672|GO:0006468
Pste1g02750 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pste1g02750 672 MobiDBLite consensus disorder prediction 1 190 - -
Pste1g02750 672 MobiDBLite consensus disorder prediction 153 190 - -
Pste1g02750 672 SUPERFAMILY Protein kinase-like (PK-like) 311 602 IPR011009 -
Pste1g02750 672 FunFam proline-rich receptor-like protein kinase PERK1 307 404 - -
Pste1g02750 672 SMART serkin_6 329 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02750 672 PRINTS Proline rich extensin signature 43 59 - -
Pste1g02750 672 PRINTS Proline rich extensin signature 60 77 - -
Pste1g02750 672 PRINTS Proline rich extensin signature 13 25 - -
Pste1g02750 672 PRINTS Proline rich extensin signature 78 103 - -
Pste1g02750 672 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02750 Pste-Chr1 11309098 11313270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02750 196 649 Trihelix Transcription Factor Family AT1G70460 51.068 1.74e-153 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pste1g02750 PK_Tyr_Ser-Thr 3.6e-45 CL0016