Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02745 CACCTTATGACAAACGATACAAATTTAGGGAACTTTATGGAGTTGCCTAAGGTTCGTGTGGGTTTGAAAAGGGAATTTGCCAATGCCATGAGGGCACAATCAGAAATATGCAATTCTCTAGGTCGCACTCGATCTAACAATACCCGTAATGTAATTCAGGTCCCTAATCGATATGCTCGAAAACGGTTTAGAAAGTCTAGTTCATTTAAAGTAAAGCAAGAAACTCTCGCTAGTTTGGCAAGAACTGAGAAGGATATTAGTGATGCTTCGAGCAAAGAGGAGAAAAAAGGTGATATGTTGAACGATCAAGAACATAAAAGTCAAGTGGCGAACAAAACTAAAGTGGTTTTAGTTTGTGACAAAAATAATAGAAATGGTGAACTTAAGAGCATAACAGAGACTGAAGCTGCAATTGTTATTTCTGAAGAAAAGCATAACAACGATGAACCTAAAAGCGAAGAGGAAAATGAAGTTGCAATCGTTGTTAGTTGTGAAGATAACAAGAATGATGAACCTAAAACTGAGGTGGTTCAAATACAAATGCAATCTGTTCATGATTATGGTGGGGTTGAGAATGAAGGTAGAGATAGTGGGTTGTTCCAATTTTGGGCAAACCCTGTAAAGAGGTTTATGCAACAAAAGCCAAAAAAAGTGAAAGATGGTGATGGTAAGATGACAAGTGATGGAATTGAGAAGGAAGATGAGGGTGGCTTTATGACTGATGCTTCAACCATAAGGAGAATGTCTAAGGGTTTTGTGGATAAAAAGTTTCCTAGCACCTTAAAGGACCTCTTATCTTCTGGGATTCTTGAAGGACTTCATGTGAATTATGTTCGTGGCTTGAAGGTGAATACGACAAGACTTTCAGGAGTGATTTCTGGCAATGGGGTTATATGTTATTGTGAAGCTTGTAATGGAGTTGATGTTGTAACACCCACAATTTTTGAGCTACATGCTGGTAGTTTAAATAAACGTCCTTCAGAGTATATTTTTATTGAGAATGGGGCACGCTTCATGTCAATGTTGTATCAAGATTTTTGCAATTTATGCGTGGGATTGTTGAAGAACTATCAACCTCACCTTACTTCAACAATGAGCAGAAACAATAATTATGTTTCAAAAGCAGTTCAATCTAGATCTTCAGAATCAGTTGTGCTTCCTAATTCATTAAACCATGGAATGAAACACAACTTATCTCATTCTAAGAGTCAGGGAAAAATAACTAGGAAGGATCTACGCTTGCATAAGTTAGTATTTGAAGCAGATGTGCTAAAAGATGGAACTGAATTAGCATACTATGCTCGAGAAAAGTTGGTTACAAACGAGGATCTGGAATTGTTTGTAGTTGTTGCGAATGTGAGGTTAGCCCTTCTCAATTTGAAGCACATGCTGGTTGGGCATCACGACGAAAACCTTACTTGCACATATACACATCTAATGGAGTCTCGCTCCATGAGTTGGCTATCTCTTTATCAAAAGGCCGTAAGTTTTCTACCAATCAAAATGATGACCTTTGCAGCATATGCGGAGATGGAGGTGATCTTTTGTGTTGTGATGGATGTCAAGAGTTTTCACATAGATTGTGTACCTCTTCCATGTATTCCAACTGATAAATGGTATTGTAAATATTGTCAAAATGTGTTCCAAAAGGACATATATGTTGCACGTAATCAAAATGCAGTGGCAGCGGGAAGGATTGAAGGCATTGATCCTTTAGACCAAATAAACCAAAGATGCATTCGTATTGTTAAAGAGTCTGAACTTGGTGGATGTGTCCTATGCAGGGGCCAAGATTTCAGCAAAAGCTTTGGTCCTCGAACAGTAATTATTTGTGATCAGTGTGAAAAGGAATATCATGTTGGGTGTTTAAAGGATCATAATATGCAAAATTTGGAGGAATTACCTGAAGGGAATTGGTTTTGTTGTTTAGATTGTGATCAAATTCATACTACTCTAGAGAATTTGGTGGCTCGAGGGGAAGAGATTCTTCCAGATTCTCTTGTAAGTTTGATTAGAAAGAAATATGACGACAAAGGTTTAAAAATTAGGATTGACCTTGATATAAAATGGAGGGTTTTGAATTGGAAAATGGCTGATACTAAAGAGACTAGGCAATTGCTTTCAAAAGTTGTGGCTATTTTCCATGAGCAATTTGACCCCATAATTCATTCTACTACTGGCATTGATTACATTCCGACAATGCTTTTTGGGAACATCAAGGGTCAAGATTTTAGTGGGATGTACTGTGCATTGCTTATTTCAAAGGTTGTATCTGCTGGAGTATTTCGTGTGTTTGGACCAGAAGTTGCAGAGCTACCTTTGGTGGCAACAATTGCTAATTGTCAAGGACAGGGTTATTTCCAATCCTTATTTTGTTGTATTGAGGGGTTGCTCAGGTCATTAAAAGTAAAACACTTTGTCCTACCTGCTGCTGATGAAGCTGTATCAATATGGACTAATAAATTTGGGTTTACAAAGCTAAACCAAGACGAGGGTTATTTCCAATCCTTATTTTGTTGTATTGAGGGGTTGCTCAGGTCATTAAAAGTAAAACACTTTGTCCTACCTGCTGCTGATGAAGCTGTATCAATATGGACTAATAAATTTGGGTTTACAAAGCTAAACCAAGACGAGATCAACAATTATAGGAGATATTACTACATGATGATATTTCAAGGGACATCTTTACTACATAAGCCAATTCTTGATCTTTGAAGTACAATTCACGGGAGTATATTAAACTTAGGGTACCTATTTGCAAATGTGCTTTTTTTTAGGTTTTGTTTGGTGCACAATAGAATACACCTCTAAATTGGTGTAAAAAAAATCAATCATTCTCACTTATCATACTTTCTGTGGTACAAATTTTAGAGGAGGAATTTTGTTTTTAAAATAGTGGATACAAGGACATGGAATTTTTT 2921 0.3694 HLMTNDTNLGNFMELPKVRVGLKREFANAMRAQSEICNSLGRTRSNNTRNVIQVPNRYARKRFRKSSSFKVKQETLASLARTEKDISDASSKEEKKGDMLNDQEHKSQVANKTKVVLVCDKNNRNGELKSITETEAAIVISEEKHNNDEPKSEEENEVAIVVSCEDNKNDEPKTEVVQIQMQSVHDYGGVENEGRDSGLFQFWANPVKRFMQQKPKKVKDGDGKMTSDGIEKEDEGGFMTDASTIRRMSKGFVDKKFPSTLKDLLSSGILEGLHVNYVRGLKVNTTRLSGVISGNGVICYCEACNGVDVVTPTIFELHAGSLNKRPSEYIFIENGARFMSMLYQDFCNLCVGLLKNYQPHLTSTMSRNNNYVSKAVQSRSSESVVLPNSLNHGMKHNLSHSKSQGKITRKDLRLHKLVFEADVLKDGTELAYYAREKLVTNEDLELFVVVANVRLALLNLKHMLVGHHDENLTCTYTHLMESRSMSWLSLYQKAVSFLPIKMMTFAAYAEMEVIFCVVMDVKSFHIDCVPLPCIPTDKWYCKYCQNVFQKDIYVARNQNAVAAGRIEGIDPLDQINQRCIRIVKESELGGCVLCRGQDFSKSFGPRTVIICDQCEKEYHVGCLKDHNMQNLEELPEGNWFCCLDCDQIHTTLENLVARGEEILPDSLVSLIRKKYDDKGLKIRIDLDIKWRVLNWKMADTKETRQLLSKVVAIFHEQFDPIIHSTTGIDYIPTMLFGNIKGQDFSGMYCALLISKVVSAGVFRVFGPEVAELPLVATIANCQGQGYFQSLFCCIEGLLRSLKVKHFVLPAADEAVSIWTNKFGFTKLNQDEGYFQSLFCCIEGLLRSLKVKHFVLPAADEAVSIWTNKFGFTKLNQDEINNYRRYYYMMIFQGTSLLHKPILDL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02745 904 MobiDBLite consensus disorder prediction 213 236 - -
Pste1g02745 904 SUPERFAMILY FYVE/PHD zinc finger 514 546 IPR011011 -
Pste1g02745 904 Pfam Tify domain binding domain 290 338 IPR032308 -
Pste1g02745 904 SUPERFAMILY FYVE/PHD zinc finger 590 643 IPR011011 -
Pste1g02745 904 PANTHER AUTOIMMUNE REGULATOR 522 831 - -
Pste1g02745 904 MobiDBLite consensus disorder prediction 80 107 - -
Pste1g02745 904 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 726 834 IPR016181 -
Pste1g02745 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 506 558 IPR013083 -
Pste1g02745 904 Gene3D - 686 830 - -
Pste1g02745 904 SMART PHD_3 590 646 IPR001965 -
Pste1g02745 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 589 648 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02745 Pste-Chr1 11249208 11257865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02745 406 901 PHD Transcription Factor Family AT2G36720 39.806 4.73e-111 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03117 3 24015493 24021271 Pste1g02745 1 11249208 11257865 PCT