Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02744 ATCCAGTACTCCGAGAAGTATTTTGACGACACTTACGAGTATAGACATGTGGTTCTGCCTCCTGAAGTCGCCAAATTGCTTCCCAAGAATCGCCTTCTCTCTGAATTGCGCTTGTGTCCAATCTACCCTAGAATTAGTGTTCGGCACGTAATGGATGTGGGTAGATTTTGTTCTAATTTTATTGAGTATTGGAGGTTGAGTTCCTGTGATGCCCTAGATTGGGGGGCATGTGTAGCCAATTTACTTTACTCTATGAACTGGAAAATTGAGGGCGACCTTGAGATAAATGAGTGGCGGGCAATTGGAGTTCAGCAGAGCCGTTGTTGGGTTCATTATGCAATTCATCGTCCTGAGCCACACATAATGCTTTTCAGGAGGCCTCTGAATTATCAGCAGCAGCAGGAAAACCAGGCCCAGCAAAGCATGCTTGTCAAATGA 438 0.4521 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSELRLCPIYPRISVRHVMDVGRFCSNFIEYWRLSSCDALDWGACVANLLYSMNWKIEGDLEINEWRAIGVQQSRCWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLVK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02744 145 Pfam Cyclin-dependent kinase regulatory subunit 1 36 IPR000789 GO:0016538
Pste1g02744 145 Pfam Cyclin-dependent kinase regulatory subunit 93 127 IPR000789 GO:0016538
Pste1g02744 145 SUPERFAMILY Cell cycle regulatory proteins 1 36 IPR036858 GO:0016538
Pste1g02744 145 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 96 141 - -
Pste1g02744 145 Gene3D - 85 142 IPR036858 GO:0016538
Pste1g02744 145 Gene3D - 1 51 IPR036858 GO:0016538
Pste1g02744 145 SUPERFAMILY Cell cycle regulatory proteins 93 139 IPR036858 GO:0016538
Pste1g02744 145 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 3 21 IPR000789 GO:0016538
Pste1g02744 145 SMART CKS_2 1 129 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02744 Pste-Chr1 11244323 11245224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02744 1 35 Core Cell Cycle Gene Families AT2G27970 91.429 1.01e-17 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02744 1 11244323 11245224 Pste1g02744 1 11244323 11245224 ECH