Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02735 ACTTCTCACAAAGTGTTAATCTTGAACGTAATGGATTTTCATCAAGAAACTTTAGAGCTCATTAATGGCTTTGAGGTGCACGACTTTGTCCAAGATCCCAACTTAGATCAGTTCATCAATTTGATTTATTGGGAGAATAAAGATGCTATTTGTAACTTCAATTCCGAGCTCATGAATGAAGCATTCATTGATAACTCATTCCTGTCACACACTGAAATCCCATTTGATCAGAGCAATAGTAATTCTGGTAGTGTTTATGGTCCAAACTCTACACATAGCTCCTTCTCTTGTTTTGATGGGGAAGCCAAGGAAGGAGGAGAAGAAGAAGAAAATGACATGGGGGATTCTTCTGAAACAACAACCACAACAATCGCTAATAAAAGTGCTAATACTAAGCCAAGACCACAAATTGATAGGTCCAAAACTTTGGTTTCTGAGAGAAGGAGAAGAGAACAAATGAAGGAGAAGCTTTATAGATTGAGGTCTTTGGTTCCCAACATTACTAAGATGGATAAAGCCTCTATCATTCGAGATGCTGTTTCATATATGCATGAGCTTCAAGCACAAGCCAAGATGATGAAGGCTGAGGTTGAAGGACTTAAAACATCCTTATTGGTGTCCAAAAATTATCAAGGGTCAATTGAAAATTATCCAATGAAGATTCAATTTAACAACAATAGACGTTCAATCTGCAAGAGGATAAGCCAGGGGGTGGCAGCCTCATTGTACAAGTCTCTCGAATCTCTGACAGGCTTCAATGTTCAGAATTCAAACTTGGCCACAGTTTCTAATAGTTTTCTGCTTACATTTTCATTGAGTGCGAAAAGCTCTGAGCCAGAAATTAACCTGCACAACTTAAAGCTATGGGTGACTGAAGCTTTTGTGAATCAAGGCTTTGAATTAAATACCTTTTTTTACGCATGACTTTCAATTTATAAACTGTATGCTTTTAATATATTAAGGTTGCGTTAGAACTATTATGACAAGACATGAAAATATGTAACATACATGTATGTATCTAGGTGCTGGTAACTATGAGCTTTGACATATGATTCTCTATTTTTGAGCCATTATTATCAGATAATAGCTATATTAATTAATGC 1103 0.3626 TSHKVLILNVMDFHQETLELINGFEVHDFVQDPNLDQFINLIYWENKDAICNFNSELMNEAFIDNSFLSHTEIPFDQSNSNSGSVYGPNSTHSSFSCFDGEAKEGGEEEENDMGDSSETTTTTIANKSANTKPRPQIDRSKTLVSERRRREQMKEKLYRLRSLVPNITKMDKASIIRDAVSYMHELQAQAKMMKAEVEGLKTSLLVSKNYQGSIENYPMKIQFNNNRRSICKRISQGVAASLYKSLESLTGFNVQNSNLATVSNSFLLTFSLSAKSSEPEINLHNLKLWVTEAFVNQGFELNTFFYA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02735 307 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Pste1g02735 307 Gene3D - 129 214 IPR036638 GO:0046983
Pste1g02735 307 MobiDBLite consensus disorder prediction 116 137 - -
Pste1g02735 307 SMART finulus 143 192 IPR011598 GO:0046983
Pste1g02735 307 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 51 296 - -
Pste1g02735 307 Coils Coil 183 203 - -
Pste1g02735 307 MobiDBLite consensus disorder prediction 96 137 - -
Pste1g02735 307 Pfam Helix-loop-helix DNA-binding domain 145 187 IPR011598 GO:0046983
Pste1g02735 307 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 212 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02735 Pste-Chr1 11154518 11156321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02735 21 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 41.905 8.93e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g02735 HLH 3.4e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03130 3 24087265 24088640 Pste1g02735 1 11154518 11156321 PCT