Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02734 AAAAACAACGACTATAACAACAAACTGAAAAGTGGGTTTTGCTTCTAGTTGCACGCAGTATTATTGAAACCACACAAGAGGTTGTTTCATCCCATTGTCTGCTTGCATCAGAGCACTCTCAATCTAGCCCCACACAACTCTCTGCTATGGAACCTGAGATTCTGAATTTTGGGTGCGTCCACTACAGAAGGAGATGCGCCGTGCTGTGATGAGGTTTTTGATTGTAGGCATTGCCACAATGAAGCCAAGAACTCTGAGGAGGTTGATGCTGTGGATCGTCATGATGTTCCGCGCCACCAAATTAAGAAGGTTATCTGCTCCATGTGTGATATAGAGCAAGATGTTCAACAGTACTGTATAAAATGTGGAATATGCATGGGCCAGTACTTTTGTGCTGTATGCAAATTCTTTGATGATGATATTTCAAAGAACCAATACCACTGTGATGAATGTGGAATTTGCAGTTTCCTAACCACTATATTTCATGTTGTGTATCGTTTAGCAGAATTTGATAATCATCTGCTCTATTTCTACAGAACTGGAGGCAGGGATAACTTTTTCCATTGCAAGAGATGCAGATGTTGCTACTCCAAGGTAATGGAAAAGGGGCATCATTGTGTAGAAGGAGCAATGCATAACAATTGCCCTGTTTGCTTTGAGTATCTGTTTGATACAGTAAGAGAAATCAGTGTCTTACCTTGTGCACATACTATACATTTAGACTGCCTTAAAGAGATGGAAAAACATCATTGGTACTCATGTCCCGTTTGCTCAAAATCCATCTGTGACATGTCAAGTGCGTGGAAGAAGTTTGATGAAGTGCTTGCCTCATCTCCAATGCCTGAAAACTATAAAGACAAGATGGTGTGGATACTTTGCAATGATTGTGGAGTTAATTCCCATGTACAATTCCATCTTGTGGCCCATAAGTGCTTAAGTTGCAATTCATACAACACAAGACAGATACAGGGAAAACCTGCTACATCAATATCTCCTCTAGGGTGACTGAAATGGTGAGGTGAACATTGGGTTGCAGAAAGATCTCTTGGAATGGAAACACCTCTTGTGTGCAGAGTTACTCAGCTATGATATAGTAAAATAAAACTCTAATGGTCAAAACTTAGATATTAGGAATATAAACTCGGTTTAGGCTGCTTTTATTGGTGTTGTTAAAACTAAAGAAACAATTAGGTCTCCTTATCATGGCCGACGTGGCATTATCTGAAAAACCATGAGAAGATAAGCAGAGATTTAAAGCTTCCAAAATCAAGCCAATGTAGTTAAGCATACAAGATATAATTGACCTTGGAAAGGATCTTAACAATTTTCATAAGACAAAGGTCGTGTAAAAAGACGAAGATTTTCATATTAAATGATTATTGCTAAT 1387 0.3879 MCDIEQDVQQYCIKCGICMGQYFCAVCKFFDDDISKNQYHCDECGICSFLTTIFHVVYRLAEFDNHLLYFYRTGGRDNFFHCKRCRCCYSKVMEKGHHCVEGAMHNNCPVCFEYLFDTVREISVLPCAHTIHLDCLKEMEKHHWYSCPVCSKSICDMSSAWKKFDEVLASSPMPENYKDKMVWILCNDCGVNSHVQFHLVAHKCLSCNSYNTRQIQGKPATSISPLG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02734 227 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 2 217 - -
Pste1g02734 227 Pfam Ring finger domain 106 150 IPR001841 -
Pste1g02734 227 SUPERFAMILY RING/U-box 107 155 - -
Pste1g02734 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 171 IPR013083 -
Pste1g02734 227 Pfam Zinc-ribbon 155 213 IPR039512 -
Pste1g02734 227 ProSiteProfiles Zinc finger CTCHY-type profile. 19 107 IPR017921 -
Pste1g02734 227 ProSiteProfiles Zinc finger RING-type profile. 108 151 IPR001841 -
Pste1g02734 227 Gene3D - 179 222 - -
Pste1g02734 227 FunFam RING finger and CHY zinc finger domain-containing protein 1 179 222 - -
Pste1g02734 227 SMART ring_2 108 150 IPR001841 -
Pste1g02734 227 SUPERFAMILY Zinc hairpin stack 20 101 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02734 Pste-Chr1 11135671 11140365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02734 16 218 C2H2 Transcription Factor Family AT3G18290 36.453 1.95e-36 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02734 1 11135671 11140365 Pste1g02734 1 11135671 11140365 ECH