Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02709 GCGAGACAGCTTGAGATTTTTCAGGGAATTCCCAAATAGAGAGAGATGGGAAGAGCTCCATGTTGTGACAAGGCAAGTGTTAAGAAAGGGCCATGGGCACCAGAAGAAGACACTATGCTGAAGGAGTACATAGAGAAGCATGGAACTGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTTAAGAGATGTGGGAAAAGTTGCAGATTGAGATGGCTCAACTATCTCAGGCCCAACATTAAGCACGGAGATTTTTCTGATGAGGAAGACAGAATAATTTGCAGCCTCTATGTCAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAGTTACCAGGAAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGTTGAAGAAAAAACTCATGGGGTTGATTCCTCTTTCTCATCAAAGAAAACAACCTTCATTTCCATCCTCTTCTCTTCAAAACCCTCCATCTCACCAACTGTACGGAGAGTATTGCACCTATAGCCCAATAGGAACATCATCTTTCACAGGTGTTGAACTTGAACCCTATACCCTTCCTCCAAGTAACTATGCAAGCACAAGCAGCAACCCCTTTTACCAAAACCAAGACTCCATGACTAGCCTTAGCCCCATGAAATACTATTACCCTATCAAAGACAACATGCTCATGTTTGGAAGCGAAGGAAGTTGCAGTTCCTCTGATGGAAGCTGCACTCAAGGCGTGGAAATCAAGCAAGAAGAAATTGGTTACCAGGGTTACAATAATGATAACTTTATGCTTTGTTACAGCAACAGTAATGATGGAGAAAAGTCATGTGTTGGTGGGTGCTATAGCCAATCGTTAACACCGTTGGATTATGATCTCGAGGATATTAAACAATTGATTAGCAGCACTAGCTTCAATAATGTTGATGAAAACAAGACAGAAGAGAAGGGCTTGTACTACTACTACTACTAG 957 0.4222 MGRAPCCDKASVKKGPWAPEEDTMLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLIPLSHQRKQPSFPSSSLQNPPSHQLYGEYCTYSPIGTSSFTGVELEPYTLPPSNYASTSSNPFYQNQDSMTSLSPMKYYYPIKDNMLMFGSEGSCSSSDGSCTQGVEIKQEEIGYQGYNNDNFMLCYSNSNDGEKSCVGGCYSQSLTPLDYDLEDIKQLISSTSFNNVDENKTEEKGLYYYYY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02709 303 Gene3D - 7 68 - -
Pste1g02709 303 PANTHER OS09G0431300 PROTEIN 1 252 - -
Pste1g02709 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pste1g02709 303 CDD SANT 71 113 IPR001005 -
Pste1g02709 303 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste1g02709 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pste1g02709 303 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pste1g02709 303 FunFam Transcription factor RAX3 7 68 - -
Pste1g02709 303 Gene3D - 70 139 - -
Pste1g02709 303 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pste1g02709 303 CDD SANT 16 62 IPR001005 -
Pste1g02709 303 SMART sant 13 64 IPR001005 -
Pste1g02709 303 SMART sant 67 115 IPR001005 -
Pste1g02709 303 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pste1g02709 303 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pste1g02709 303 FunFam Transcription factor MYB36 70 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02709 Pste-Chr1 10882971 10884567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02709 1 119 MYB Transcription Factor Family AT5G57620 88.235 3.33e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g02709 Myb_DNA-binding 3.1e-13 CL0123