Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02703 TCTCTATATATATAGCCCCAACTTGCTCACACAGCTTCCACAACAACTACCTCCTTCAAAACTCAAACACCGAACCCTAAGCTCTCCTTCGGGTTCGTCTTCCCTTTCTCTTCGCATAGAGCGAAACCCTAGCCTCGTATTCCAGATCTACTTTCTCCCCTTTCCCGATCCAAGATGGTCTCCGATGCCAGTAAGAAGAAGGCCGCACAGAAGAAGGCCGCCGCCGCCGCCAAGAGAGGTGGCAAGGCTGCCGCCGCCGCCGTCATCGCCGCCGCGTCTTCTAAAGCCGCCGATAAGGCTGCCAACGGAATCGCCAATATGCAGATATCGGATCGGACATGCACCGGCGTGCTTTGTTCCCATCCCCTTTCAAGAGATGTCCGACATGGCCATTCTACCATGTTGCCTATCTTGGTTCTTGTGAATGTAACCAAATACTCACCTATTACCAATTCTTTGGAGGTAGTTGATCTGTGGTGTATTGATTCATTTGGTTATCTATTTTTACAGATAGAGTCTCTATCTGTTACATTCCATGGGCATGATCTCATTGTTGACTCTGAATTGGAGCTAAATTATGGGAGGCGTTATGGTTTACTCGGATTAAATGGTTGTGGAAAATCTACACTGCTTACAGCCATTGGTTGTCGGGAACTTCCTATTCCCGACCACATGGATATCTATCACCTTAGCAGGGAGATTGAAGCCTCTGACATGTCTGCATTAGAAGCTGTCATAAGCTGTGATGAAGAAAGGTTGAAACTGGAGAAAGAAGCTGAAGTTTTGGCTGCACAGGATGATGGAGGTGGTGAATCCCTTGAACGCATTTATGAACGATTGGATGCACTAGATGCATCTACTGCAGAAAAGCGTGCTGCTGAAATCTTACACGGTCTTGGCTTCAACAAGCAAATGCAGGCAAAGAAGACACGTGATTTTTCGGGTGGCTGGAGAATGAGGATTGCATTAGCGCGAGCTCTATTTATGAACCCAACCATTCTTCTCCTTGATGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAATTTTGAACGTATTCTGGTTGTGATTTCACACTCCCAGGACTTCCTTAATGGTGTCTGCACAAATATTATTCACATGCAAAGCAAAAAACTGAAGCTCTACACTGGTAACTACGATCAATATGTTCAGACACGTTCTGAGCTAGAAGAGAACCAGATGAAACAGTACAAGTGGGAGCAGGAGCAGATTTCCTCAATGAAGGAATACATTGCCCGATTTGGCCATGGTTCTGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACACTGGCAAAAATGGAACGTGGTGGACTTGCAGAGAAGGTTGTAAGAGACAAAGTTTTGGTATTCCGATTTACTGATGTGGGAAAACTCCCCCCTCCTGTTCTGCAGTTTGTTGAGGTGTCATTTGGTTACACTCCTGATAACCTCATATACAAGAACATTGACTTTGGGGTTGATTTAGATTCTAGGGTGGCACTGGTTGGACCCAATGGTGCTGGGAAGAGTACACTATTGAAGCTAATGACAGGTGATTTGATGCCAACTGATGGCATGGTACGCCGCCATAATCATCTTCGGATTGCACAGTATCACCAGCATTTGGCTGAGAAGCTAGACTTAGAAATGTCTGCTCTCCTGTTTATGATGAGAGAATACCCTGGAAATGAGGAAGAGAAGATGAGGGCAGCGATTGGTAAGTTTGGTCTGTCAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTATCTGATGGGCAAAGGAGTCGAGTGATATTTGCTTGGTTAGCTTGGAGGCAGCCTCAAATGCTTCTTTTGGATGAGCCCACTAATCATTTAGATATTGAGACAATTGACTCGTTGGCTGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTCAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTATGTGCTAATCAAAGTGTCACCAGATGGGAGGGTGACATTATGCAGTTCAAGGAGCATCTAAAAGCTAAGGCGGGTTTATCTGACTGAACTAGCTAGGTAGTGGGGATTTCTCACTATTGAAACATTTCTCACTTACAATATACGAGTGGGTGCTGCCGTTTGAGTTGGATTTCCTAACTTTGGCGATTTCCAATGGCATTATCGGTGTCTTGGTGTAGAAGGTGATTACGATTTTTGTCCTAAGCCGAGATGCCTCTGGGTTGGGTTTGGACTCAATAATTTTTTCCTAGTTACTATTTTTTGTGCTTATCATTTATTTGTTTGGTTGTTAACCAGCTTGGATAAATGGGATATCTATCACCTTCAGGTGGGATGGTCCCTAACTGAAATCTACGGACGAGGCTGATTCTATAAATGAAATATTGTACCGAGAATATTATATTTGTGGTATTATAATTACTTAGTTCCCTCATTGGATTCTTTCTTCCTTATAGCTCTTCATTATACACCTAATCTTCC 2520 0.4437 MVSDASKKKAAQKKAAAAAKRGGKAAAAAVIAAASSKAADKAANGIANMQISDRTCTGVLCSHPLSRDVRHGHSTMLPILVLVNVTKYSPITNSLEVVDLWCIDSFGYLFLQIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSALEAVISCDEERLKLEKEAEVLAAQDDGGGESLERIYERLDALDASTAEKRAAEILHGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKNFERILVVISHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLAEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLMPTDGMVRRHNHLRIAQYHQHLAEKLDLEMSALLFMMREYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCANQSVTRWEGDIMQFKEHLKAKAGLSD 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02703 637 ProSitePatterns ABC transporters family signature. 255 269 IPR017871 GO:0005524|GO:0016887
Pste1g02703 637 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 70 632 - -
Pste1g02703 637 FunFam Abc transporter f family member 1 111 375 - -
Pste1g02703 637 FunFam ATP-binding cassette sub-family F member 3 382 636 - -
Pste1g02703 637 Pfam ABC transporter 438 569 IPR003439 GO:0005524
Pste1g02703 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 616 IPR027417 -
Pste1g02703 637 CDD ABCF_EF-3 111 328 - -
Pste1g02703 637 Gene3D - 108 375 IPR027417 -
Pste1g02703 637 Pfam ABC transporter 322 398 IPR032781 -
Pste1g02703 637 CDD ABCF_EF-3 422 613 - -
Pste1g02703 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 111 351 IPR003439 GO:0005524
Pste1g02703 637 Pfam ABC transporter 129 283 IPR003439 GO:0005524
Pste1g02703 637 Coils Coil 329 349 - -
Pste1g02703 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 637 IPR003439 GO:0005524
Pste1g02703 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 358 IPR027417 -
Pste1g02703 637 Gene3D - 387 635 IPR027417 -
Pste1g02703 637 SMART AAA_5 447 635 IPR003593 GO:0016887
Pste1g02703 637 SMART AAA_5 135 337 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02703 Pste-Chr1 10820572 10824181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02703 422 609 Calmodulin-binding Proteins AT2G36910 25.688 2.73e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03153 3 24322379 24326299 Pste1g02703 1 10820572 10824181 PCT