Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste1g02701 | GTAGGAAGGATATAAGAATAAGAAGACACGACCCTCTCTACATTCTCATTCTCTGCGTTTTGGCTTTGATCTTTGATTGCACCAATGTCTCACAAACCTGATAGTACTTCCGACTCAAAATCTGGGAAGAAGGACTTTTCCACCGCGATTCTGGAACGAAAGAAATCGCCCAACCGATTAGTGGTCGACGAGGCCGTTAACGATGATAACTCTGTGCTTACCATGCATCCTCAAACCATGGAAAAGCTCCAACTTTTCCGGGGCGACACTGTCCTCGTCAAGGGGAAGAAACGGAGGGATACGGTTTGCATAGCCCTTGCGGACGAGAATTGTGAGGAGCCGAAGATAAGAATGAACAAAGTTGTGAGGTCCAATTTGAGGGTTCGTCTTGGGGATGTTGTGTCTGTGCATCCCTGCCCTGATGTCAAGTATGGCAAGCGCGTCCACATTCTTCCCATTGATGACACTATCGAAGGTGTCTCTGGCAATCTCTTTGATGCTTACTTGAAACCATATTTCTTGGAGGCTTATCGTCCTGTCAAAAAGGGGGATCTATTTCTTATCCGAGGAGGGATGAGAAGTATAGAGTTCAAGGTTATTGAAACTGATCCTGGGGAGTATTGTGTGGTTGCTCCAGACACAGAAATATTCTGTGAGGGGGAGCCTGTTAAAAGAGAGGATGAAGAAAGGCTGGATGATGTTGGGTATGATGATGTGGGTGGTGTCAGGAAGCAAATGGCACAGATTCGTGAGTTGGTAGAGCTTCCACTGAGACATCCACAACTTTTTAAATCAATCGGTGTGAAACCACCCAAAGGAATTTTGCTGTATGGACCACCAGGCTCTGGTAAGACGTTAATAGCTAGAGCTGTTGCTAATGAAACTGGAGCATTCTTCTTTTGTATTAATGGCCCAGAGATTATGTCCAAACTGGCTGGAGAGAGTGAAAGCAATCTCAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCTCCCTCTATCATCTTTATTGATGAGATAGATTCTATTGCACCCAAGCGGGAGAAGACACACGGTGAAGTTGAAAGGAGGATTGTTTCACAACTTTTGACACTTATGGATGGATTGAAATCTCGTGCTCATGTTATTGTTATTGGAGCTACAAATCGACCAAATAGCATTGACCCTGCATTGAGAAGGTTTGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGGAGACTTGAAGTCCTTCGCATACATACCAAAAACATGAAGCTTTCAGATGATGTTGATTTGGAGAGAATTTCAAAAGATACTCATGGATATGTTGGTGCTGACCTTGCTGCCCTTTGCACTGAAGCTGCTCTGCAATGCATCAGGGAGAAGATGGATGTCATTGATCTGGAAGATGAGAGTATAGATGTGGAAGTACTGAATTCTATGGCAGTTTCAAATGAGCATTTCCATACTGCGCTAGGAACAAGCAATCCATCTGCTTTACGAGAAACTGTTGTTGAAGTGCCTAATGTCAGCTGGGATGATATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTGCAAGAGACTGTTCAATATCCAGTGGAGCACCCAGAAAAATTTGAAAAGTTTGGTATGTCCCCATCAAAAGGAGTTCTCTTCTATGGTCCACCAGGATGTGGGAAAACTTTGTTGGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATCAGTGTGAAAGGCCCAGAATTGCTCACTATGTGGTTTGGTGAAAGTGAAGCCAATGTTAGAGAGATTTTTGACAAGGCCAGGCAATCAGCTCCATGCGTCCTCTTCTTTGATGAGCTTGATTCCATTGCTACTCAGAGAGGGAGTAGTGTTGGGGATGCTGGTGGTGCTGCTGATAGAGTTCTAAATCAACTTCTGACTGAAATGGATGGCATGTCTGCTAAAAAGACCGTGTTTATAATTGGGGCCACTAACAGACCTGACATCATTGACCCTGCACTTCTTCGGCCTGGTCGTCTGGATCAACTGATCTATATTCCTCTCCCTGATGAGGAGTCCCGTCATCAAATCTTCAAGGCCTGCATGAGGAAGTCACCTGTCTCAAAAGATGTTAATTTGAGAGCACTAGCTGAGTTCACTCAAGGTTTTAGTGGTGCTGACATAACAGAGATATGCCAGCGAGCGTGCAAATATGCTATAAGAGAAAACATAGAAAAGGACATAGAGCGTGAGAGGAGGAGAAGTGAAAACCCCGAGGCCATGGATGAAGACATCGACGAAGATGTTTCAGAAATCAAGGCATCTCATTTTGAAGAGTCAATGAAGTATGCACGCAGGAGTGTTAGTGATGCTGATATACGCAAATACCAGGCATTTGCTCAGACCTTACAACAATCCCGGGGATTTGGAAGTGATTTTACGTTTCGAGAAACTGGTGGTAGAGCTGCTGGATCTGACACCTTTGCAACTTCGGCTGGTGGAGCTGATGAAGATGATCTGTATAGTTAGGTTTTATTTATTTGAAGTTACATACCTAGCTCAAATGACAATAGTAGACTGCCCCCCTCAAAGGGTTAACTTAGCCTTTTTCAGATCTTACTTTTCGTATATTCAAAATATTAACCAACTTTAGTACCGGCTTATGATGGAAAAAATTCTGGTTATGCCAGAAAATAATTGAGCATTTTATTCTAAGATTGCTGCATTATCCTGTATTTCAGTTCTGTAGTTGGTATTAGTATAACGTTTACAA | 2749 | 0.4318 | MSHKPDSTSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVLTMHPQTMEKLQLFRGDTVLVKGKKRRDTVCIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHPCPDVKYGKRVHILPIDDTIEGVSGNLFDAYLKPYFLEAYRPVKKGDLFLIRGGMRSIEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDVEVLNSMAVSNEHFHTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRHQIFKACMRKSPVSKDVNLRALAEFTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEAMDEDIDEDVSEIKASHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSDFTFRETGGRAAGSDTFATSAGGADEDDLYS | 806 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste1g02701 | 806 | Gene3D | - | 377 | 468 | - | - | |
Pste1g02701 | 806 | FunFam | Transitional endoplasmic reticulum ATPase | 469 | 652 | - | - | |
Pste1g02701 | 806 | Pfam | ATPase family associated with various cellular activities (AAA) | 519 | 652 | IPR003959 | GO:0005524|GO:0016887 | |
Pste1g02701 | 806 | Pfam | ATPase family associated with various cellular activities (AAA) | 246 | 375 | IPR003959 | GO:0005524|GO:0016887 | |
Pste1g02701 | 806 | Gene3D | - | 469 | 652 | IPR027417 | - | |
Pste1g02701 | 806 | FunFam | Transitional endoplasmic reticulum ATPase | 207 | 375 | - | - | |
Pste1g02701 | 806 | FunFam | Cell division control 48 | 114 | 210 | - | - | |
Pste1g02701 | 806 | CDD | RecA-like_CDC48_r1-like | 210 | 375 | - | - | |
Pste1g02701 | 806 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 205 | 467 | IPR027417 | - | |
Pste1g02701 | 806 | ProSitePatterns | AAA-protein family signature. | 346 | 364 | IPR003960 | GO:0005524|GO:0016887 | |
Pste1g02701 | 806 | SMART | CDC48_N_2 | 31 | 114 | IPR003338 | - | |
Pste1g02701 | 806 | SMART | AAA_5 | 515 | 654 | IPR003593 | GO:0016887 | |
Pste1g02701 | 806 | SMART | AAA_5 | 242 | 378 | IPR003593 | GO:0016887 | |
Pste1g02701 | 806 | SUPERFAMILY | Cdc48 domain 2-like | 113 | 205 | IPR029067 | - | |
Pste1g02701 | 806 | Gene3D | - | 211 | 375 | IPR027417 | - | |
Pste1g02701 | 806 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pste1g02701 | 806 | Gene3D | - | 656 | 764 | - | - | |
Pste1g02701 | 806 | FunFam | Cell division control 48 | 377 | 468 | - | - | |
Pste1g02701 | 806 | Gene3D | - | 114 | 210 | - | - | |
Pste1g02701 | 806 | SUPERFAMILY | ADC-like | 27 | 111 | IPR009010 | - | |
Pste1g02701 | 806 | Gene3D | - | 8 | 113 | - | - | |
Pste1g02701 | 806 | CDD | RecA-like_CDC48_r2-like | 490 | 650 | - | - | |
Pste1g02701 | 806 | SMART | CDC48_2_2 | 131 | 197 | IPR004201 | - | |
Pste1g02701 | 806 | ProSitePatterns | AAA-protein family signature. | 622 | 640 | IPR003960 | GO:0005524|GO:0016887 | |
Pste1g02701 | 806 | PANTHER | AAA-FAMILY ATPASE | 404 | 770 | - | - | |
Pste1g02701 | 806 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 477 | 765 | IPR027417 | - | |
Pste1g02701 | 806 | NCBIfam | CDC48 family AAA ATPase | 32 | 768 | IPR005938 | GO:0016787 | |
Pste1g02701 | 806 | FunFam | Transitional endoplasmic reticulum ATPase | 8 | 113 | - | - | |
Pste1g02701 | 806 | Pfam | Cell division protein 48 (CDC48), domain 2 | 133 | 196 | IPR004201 | - | |
Pste1g02701 | 806 | Pfam | AAA+ lid domain | 398 | 440 | IPR041569 | - | |
Pste1g02701 | 806 | Pfam | AAA+ lid domain | 674 | 714 | IPR041569 | - | |
Pste1g02701 | 806 | Pfam | Cell division protein 48 (CDC48), N-terminal domain | 31 | 112 | IPR003338 | - | |
Pste1g02701 | 806 | MobiDBLite | consensus disorder prediction | 774 | 806 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste1g02701 | Pste-Chr1 | 10808933 | 10813665 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste1g02701 | 448 | 711 | Calmodulin-binding Proteins | AT3G56690 | 47.727 | 9.47e-80 | 275 |