Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02682 CTTCACCCTTTCTCGCTTCTCATTCTTTCATATACCAACAACACCACCACCTTCCCAACCGGAATCTTCGCACTCCCTACCAAATCTCATCAAAACTTCTTTTCGTTCGCACCTAAGGAGGCTGGAATGAGCAGCTTAAGGCCCGAATTGCATGTTGCACAACAACTTCGGCGAGACAAATTGAGGATCCAAAACAGTTCCCAACACTTGCAAGAGTTCCCTAACAACTTAGAACAGTTAACGTTACACCCGGGGTTCAACTTGGATCTCCTTCAAGTGAGAAACGTTCGAAATGGCAACATGCTTGACGAGGCCATTTATTCATCGGATATGATAACTTTTTCCACAGCTTCGAACCCTTTATCTGCTCCTAGAAACCCATTGGAGTGTCAAGAGCTTATGATGGCTCAGTATGGTTCAACTTCATTTCCTCATTCATCATCCCCAAAAGATCAACAATCTGAACCACGCAACTTAGGTGCTAATTGGATGGTGAATTATAATGAAAGTAACCCCAACAACACCTTTTCTTCTGACCTCAATAACAATGTTTCTGGTGAAATGGCCAATAGGGAAATTCAGAAGCAGTTAGGTGAAATGCATTATCCTTCTTCCTCTTCTTCACCTCCGATATACCATAATGCTTTACATGATATGGCTTATGGCGTTTGGGGAGGGAATCATGGTGAGCCTGTGATTCACTATGGAAATCAAGCACATAACGACTTACGCTTTGGGGGTGCTAATTTGTGGACAAATACTCCATTGGGTTTCAAAAAGGTTAATGAACCGGACACAAACCCTCATCAAGGTTTATCATTGTCACTCTCATCAAACTCACAATCCAAGCCTTGTTTTGAAGAAGGGTCTGCATCAGATGACCCTCAATATTCGAAGTCTGTGAAGCCCAACATGAAGCTGAATGTGCTTTCAAACAATACTGTTTATCGAAATGTTGGCCCTCTCGGTCCTTTCACTGGGTATGCCACGATTTTGAAGAGTTCAAGGTTCTTGAAGCCGTGCCAACAGCTGTTAGATGAGTGGTGCTGTCAATCGGGTCCAAAGTTTGCCAAGGGAGGGGGTTGTGATGTTCCAGAATGGGTCTCTCGAGATGTCAGTGCTGCTGCTTCTACTTCTGCTGCTCTCAATGTTGATGCAAGTGGGGGTGCTGCAAAAGGTCGTAGCAATTCGGGTGCTTCATCCTCTGTGTTGTATACTTCAAACGAAAATAATAATAATAATACTACTACTAATAGCGCTGGTGGCGGAGCCGCGAGTAACTTTTGTCTTTCTTCTCGGCCAGAGTGCCAAAAGAACAAGGCAAAACTACTGTACATGCAAGAGGAGGTTACTAGGAGATACAAACAATATCGTCAACAAATGCAAATGGTTGTTCAATCGTTTGAGTCTGTAGCGGGTCTTAGTTCGGCTACTCCTTATGTCTCCTTGGCTCTCAATATCAAACACTTCAGATGCCTAAAAAATGCTATCTCAGATCAACTGAGGCTTACATGTGAAATCTTGGGAGAGGACTTTTCAATACCAAGCACAAGTACTAGTAGTAAATTTGACAACATGGCAAGGCTAAGGTGCATGGACCAAAGCTTTCAAAAAAACAAATCTGGCGGGGCTAACATAAACTTTCTTGAGCCCCAACAACACGTATGGAGGCCCCAGAGAGGCTTACCAGAACGCTCAGTGGCAATTCTTAAAGCTTGGCTATTTGAGCATTTTCTTCATCCGTACCCCACGGACACCGATAAACACATGTTGGCTACCCAAACAGGTCTATCACGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTCCGAGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCGCAACAGAAGCCCCCAAAAAGTCTAATAAAAGTGATCAGGGAGCTTCTGCCTCTGAAGGTAGCAACCAGCCCAAATGTGATAACCAAGCTGTGAGCAGGTTTGGCATGCATGCATCATCACATGCAATACCCGAAAAGCAATTTCAGTGTTTGGAAATGGGGTCATCCTCCTCTGCAGGCAATGGGGAACACATTGGAATGGAAGAAGACCAATGGAATCAAGAGAAGAGGTCAAAACTGGAATGCCAGATTAGCACAACACCAAGCATGGATGGGACAGTGATGGGTTTTATGCCATACAGAAGAGGTGGACTTGAGGTTGGGGGTCTGGGCTCAGTGTCACTAACTTTGGGTCTTAGGCATGGTGTTGAAGGTGTACAACAACAACAACAACTACACCAAGAGGAGGAGCTTAGGCGTCACTTTGGAGGGCACATGATCCATGATTTAGTGGGCTAGTTTAGAAGAAGGAATAATAAAGGTCCTTTTGCAGCAATATATATATATTAGTCACGTCCCGTCAATGGAGCAAAAAAAGTTTTGTTTACATTTGCCAGGGAAGGACAAGATCTAGAGACAGAGGTAGGGTACTGTGTAAGCTGTTAACCTTCCCGTTTTGCTTTTGCACCAGTGAAATTCTTAAATGAAATTGGGTGCCTAACCTTCCCTTGGAAGTGGCCAACTTGCAAACATGGGGTTGGGGTGGCGGAAGCCAGGGCCAACTCTAAGGTTAAATCTCGCAACATCCATATTTCCTTAGTGTAATATTATTTAACTTTAAAAAAAACAACAATATTTATACTCTTATAAAATTCTAT 2702 0.4349 LHPFSLLILSYTNNTTTFPTGIFALPTKSHQNFFSFAPKEAGMSSLRPELHVAQQLRRDKLRIQNSSQHLQEFPNNLEQLTLHPGFNLDLLQVRNVRNGNMLDEAIYSSDMITFSTASNPLSAPRNPLECQELMMAQYGSTSFPHSSSPKDQQSEPRNLGANWMVNYNESNPNNTFSSDLNNNVSGEMANREIQKQLGEMHYPSSSSSPPIYHNALHDMAYGVWGGNHGEPVIHYGNQAHNDLRFGGANLWTNTPLGFKKVNEPDTNPHQGLSLSLSSNSQSKPCFEEGSASDDPQYSKSVKPNMKLNVLSNNTVYRNVGPLGPFTGYATILKSSRFLKPCQQLLDEWCCQSGPKFAKGGGCDVPEWVSRDVSAAASTSAALNVDASGGAAKGRSNSGASSSVLYTSNENNNNNTTTNSAGGGAASNFCLSSRPECQKNKAKLLYMQEEVTRRYKQYRQQMQMVVQSFESVAGLSSATPYVSLALNIKHFRCLKNAISDQLRLTCEILGEDFSIPSTSTSSKFDNMARLRCMDQSFQKNKSGGANINFLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGATEAPKKSNKSDQGASASEGSNQPKCDNQAVSRFGMHASSHAIPEKQFQCLEMGSSSSAGNGEHIGMEEDQWNQEKRSKLECQISTTPSMDGTVMGFMPYRRGGLEVGGLGSVSLTLGLRHGVEGVQQQQQLHQEEELRRHFGGHMIHDLVG 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02682 780 MobiDBLite consensus disorder prediction 386 419 - -
Pste1g02682 780 Pfam Associated with HOX 331 498 IPR006563 -
Pste1g02682 780 SMART prehox3 326 499 IPR006563 -
Pste1g02682 780 MobiDBLite consensus disorder prediction 635 656 - -
Pste1g02682 780 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 190 640 - -
Pste1g02682 780 ProSiteProfiles 'Homeobox' domain profile. 553 616 IPR001356 GO:0003677
Pste1g02682 780 FunFam BEL1-like homeodomain protein 9 559 621 - -
Pste1g02682 780 MobiDBLite consensus disorder prediction 393 419 - -
Pste1g02682 780 Pfam Homeobox KN domain 573 612 IPR008422 GO:0003677|GO:0006355
Pste1g02682 780 SMART HOX_1 556 620 IPR001356 GO:0003677
Pste1g02682 780 Gene3D - 559 621 - -
Pste1g02682 780 SUPERFAMILY Homeodomain-like 558 622 IPR009057 -
Pste1g02682 780 CDD homeodomain 556 617 IPR001356 GO:0003677
Pste1g02682 780 MobiDBLite consensus disorder prediction 625 656 - -
Pste1g02682 780 MobiDBLite consensus disorder prediction 259 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02682 Pste-Chr1 10585676 10592593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02682 408 625 Homeobox Transcription Factor Family AT4G34610 50.893 1.33e-63 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste1g02682 POX 1e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03175 3 24516384 24523348 Pste1g02682 1 10585676 10592593 PCT