Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02677 ATGGTTCATCTTTGGTTTGTTGCTTGGATGTGCCTAGGTGTATGCTCAGCTCAGTTGTCTTACGACCAAAATAATTGTACTTCAAATGAAATTGGACGAGGGACAAGTTACAGTTGCAAGTCAACGCAGGATTCATGCGAAACATTCTTGGTGTATCGAGCCAATGAACATTTCAATACCATTTCGGAAGTCTCAAAGCTCTTCAACAAGAACTCTGAAGAGGTGCTTCTAAAAAACAACCTCACATCTTCCTCTCTGTCTCTTGTACTCAAACAAGGTAAAGAGGTGCTTATTCCTATTAATTGCACCTGCTCTGGCCAGTTTTTTCAAGCCAGTTTAAGCTATAAAGTCCTTGACAACACCACATTTTCCGAGATTGCTTGTGGTGATTTTGAAGGGCTGCTCAAACATCTCACGCTGGCTGAGGAAAACCTTTTACAAGGTAGTAACCCAGAAGCTGGTTCTGAGCTTCGTGTGCCTCTCATATGTGCTTGTCCTGACAGTTACAATTTCACTAAGAGCAAGAAGTTGAAGTACCTTGTCACATACCCGCTAATACTGGGAGATGATCCAGACAGAGTGAGTGAAAAATTTGGCATCTCATCTGAAGAGTTTTATGCAGTTAATAACTTGACTTCCTTGTCAACTGTTTATCCCGAGACAGTTGTTTTAGTTCCTTTAAGGGATGGTCCAATCAGAATACTTAGTATTCCTGATTCTCCTTCCCCACCTCCTGGTTTTCTTCCCACAAATCCAGTGTTTATGACCCAGGAAACCACACAACCATCAAATTTGTACATTGCAGGTTCTGTTATAGGATTCTTTTTATTCATAACATTGCTTGCAAGCGGATTGTACATGAAGAGAAAGAGGAAAAGTGATGTTATCCATTCCTTTAGTCCAACAAACCCTCCCACTTTGTGGTCACCATCTAGAAGCTCTACTATATCTACCCAAACGGGTAAAGCCTCTACAACTTGGTGCCTGTCCCCAGATCTTCTTGTTGGAATAAAGTATAACTTACTCAATTATAGCATACAAGAGCTTCAAAAGGCCACCAAGAATTTCAGTGAAGAAAACAAGATCTGTCGCGAGGGTGACTTTGTCTACAAGGGTTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGATTGGAAGACACACGCCAGGTGATTGATTTACATTCTAAAATCAACCACATTAATATAGTGAATTTGCTTGGTGTTTGTTACGGTGAGAACAATGATTCATGGTCATACTTAGTTTTTGAGTTTCCCAAGAATGGATGCTTGATGGATTGCTTAGCTGATCCATGCAATCCTCTAAATTGGTACAAAAGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACACTGCTGTTCTTTTCCTTCCTATGCTCACATGAAGGTGAGTAGTAGAAACATATTCGTAACAGCTAACTGGAGGGGAAAACTGGCAGATGTTGGAAGGGCATTGGCTGCAAGTGCCATACTCACCATAAGAAATGATGGTATGGAAATTCCCAAAGGATTGGTGGCACCAGAGTTCCTCTTACATGGCTCAGTTTCTGAGAAGGTTGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTAATCTCAGGGAGGGACAACTTTGATGGGAAACCAATCAAAGATTCCCTTGGATTTTTGTTGGGGGAAGCCAGTCAAGGATTAAGGAGTTTTGTGGATCCTAATCTCAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTTTTAGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCAACTATGGATGATATCATGAAAGTCCTTGCAAAAATGGTTTAG 1857 0.4082 MVHLWFVAWMCLGVCSAQLSYDQNNCTSNEIGRGTSYSCKSTQDSCETFLVYRANEHFNTISEVSKLFNKNSEEVLLKNNLTSSSLSLVLKQGKEVLIPINCTCSGQFFQASLSYKVLDNTTFSEIACGDFEGLLKHLTLAEENLLQGSNPEAGSELRVPLICACPDSYNFTKSKKLKYLVTYPLILGDDPDRVSEKFGISSEEFYAVNNLTSLSTVYPETVVLVPLRDGPIRILSIPDSPSPPPGFLPTNPVFMTQETTQPSNLYIAGSVIGFFLFITLLASGLYMKRKRKSDVIHSFSPTNPPTLWSPSRSSTISTQTGKASTTWCLSPDLLVGIKYNLLNYSIQELQKATKNFSEENKICREGDFVYKGSVNDHEVMIKRMRLEDTRQVIDLHSKINHINIVNLLGVCYGENNDSWSYLVFEFPKNGCLMDCLADPCNPLNWYKRTQIAFDIATCLYYLHCCSFPSYAHMKVSSRNIFVTANWRGKLADVGRALAASAILTIRNDGMEIPKGLVAPEFLLHGSVSEKVDIFAFGVVLLELISGRDNFDGKPIKDSLGFLLGEASQGLRSFVDPNLKDYSLPEALCLSFLAKDCVADDPLHRPTMDDIMKVLAKMV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02677 618 ProSiteProfiles LysM domain profile. 181 225 IPR018392 -
Pste1g02677 618 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 617 - -
Pste1g02677 618 Gene3D Transferase(Phosphotransferase) domain 1 428 618 - -
Pste1g02677 618 Pfam Protein tyrosine and serine/threonine kinase 376 613 IPR001245 GO:0004672|GO:0006468
Pste1g02677 618 SUPERFAMILY Protein kinase-like (PK-like) 338 614 IPR011009 -
Pste1g02677 618 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Pste1g02677 618 ProSiteProfiles Protein kinase domain profile. 275 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02677 Pste-Chr1 10533937 10535793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02677 37 618 Receptor kinase-like Gene Family AT2G23770 29.868 5.38e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste1g02677 PK_Tyr_Ser-Thr 4.2e-25 CL0016