Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02655 AGGAAGTGGAACTTGGAAGCCATTGTTGCAAATGGAATAAATAGTTGGTTTTATGTGACACGGCTTTACTTGCAGTTGCAGCTGACAGTCAAATGCTTGGGAATGTGTCTCTCTTTAACTGCTGCTCCTTCCCTATCAGTTAATTTGAGTAGTTCATCATGTTGCTGATTGCGAGAAGTTGACACTTGGTGAAAAATCAGAATGGCGTCTGATTGTTCAAGATTTGTAAGATTTCAAGAAGATGCTGAATTAGCAAAATTGCCAACAACAAACGGTGACAGGTACAATGGAATCAAGATTAATGGAACACAAGTAGGTGAGACTAGCGGCAAAAAAGGTCTGAAGGAGACAAGGAAGTTCTTGAAGGCTAGAGTATTGTCAAGAGTGTTCTCAGAAGATTATGAGAAAGTTGGAAAAAGAACATTATTAGATCCCCGAGGACAAACCATTCACCGATGGAACAAGATTTTCTTGGTAGCATGTTTAGTTTCTTTGTTTGTGGACCCTCTATTCTTTTATTTGCCACTAGTTAGAGATGAAGTGTGCATTGATATTGGAACAGCACTTGAAGTTTTCCTCACAATGATTAGATCAATGGCCGATGTGTTTTACATGATTCAAATAGTCATGAAGTTTCGAACAGCTTATGTTGCTCCTTCTTCTCGGGTATTTGGAAGGGGAGAACTTGTTATAGACTCTTCTAAGATAGCTACTAGGTACCTGAGCAAGGATTTTTTGGTAGACTTCATTGCTGCCTTGCCTCTTCCTCAGGTGTTAATTTGGATTGTGATCCCCAATCTTGGCGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGCTTTATCGTCATTTTTCAATACTTGCCAAGGCTGTTTCTGATTTTTCCACTCTCATCCCAAATTATAAAAGCTACAGGAGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACTTGGTGCTATACATGTTGGCTAGCCATTTTTTAGGAGCTAGCTGGTACCTTCTATCCATTGAAAGACAAGAAGCATGCTGGAGGAGTGTCTGCGATATGGAGGAGCCATCGTGTCAATATGGATTCTTTGACTGCAAAAGGGTTGAAGATTCCCTCAGGGTCTCGTGGTTTATAGCAAGTAATATAACTATTTTATGCTCACCAAAGGCTAACTTCTACCAGTTTGGTATATACGGTGATGCAGTGACATCCCAAGTTACAACTGCATCATTCTTTCATAAGTACTTCTTTTGTCTGTGGTGGGGCCTGAGAAATCTGAGTTCTTTGGGACAAGGTCTTGTTACTAGCACTTATGTTGGAGAAATAATGTTTGCGATTGTTGTTGCAACCTTTGGATTGGTTCTTTTTGCATTGCTGATTGGTAACATGCAGACATATATGCAATCTACAACGGTGCGGTTAGAAGAGTGGAGGGTGAGGAGAAGTGATACGGAACAATGGATGCATCACAGGCAGCTACCAGCAGAAATAAGGGAATGCGTGAGGAAATACAACCAATACAAATGGGTAGCGACACGAGGAGTAGAAGAAGAAGGTCTTCTGAAAGGACTTCCAGCGGATATGAGGAGAGACATAAAGCGGCACATATGTCTGGAGCTAGTTAGACGAGTGGCGTTGTTCGATGAAATGGAGGAGAGGATGGTGGATGCAATATGCGAGAGGCTGAAGCCGGCGGTGTGGACAGAAAAGACGTACCTGGTGAGGGAGGGGGATCCGGTGAACGAAACGTTCTTCATAATAAGAGGGCATCTGGATTCCTACACCACCAACGGAGGGAGAAGCGGCTTCTTCAACACGTGCAGAATAGGCCCAGGTGATTTCTGTGGGGAGGAACTCCTAACATGGGCACTCGGAAGGGGACAGAGTTTCACACTCCCAAGCTCCACTCGTACCGTCAAGGCCATCTCCCAAGTGGAGGCCTTCTCCCTCACCGCCCAACACCTCCACTTCGTTGCATCGCAGTTCCCCACACTCCACACCAAACAACTCATACACAAGTTCCGCTTTTATTCCCACCACTGGAGAACCTGGGCTGCATGCTTCATACAAGCTGCATGGTCACGCTACAAGCATCGGAAACCCCATCTCTCCCCTTCTCCCCCTCCCAACTCCTAA 2133 0.4454 MASDCSRFVRFQEDAELAKLPTTNGDRYNGIKINGTQVGETSGKKGLKETRKFLKARVLSRVFSEDYEKVGKRTLLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVRDEVCIDIGTALEVFLTMIRSMADVFYMIQIVMKFRTAYVAPSSRVFGRGELVIDSSKIATRYLSKDFLVDFIAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIVIFQYLPRLFLIFPLSSQIIKATGVVTETAWAGAAYNLVLYMLASHFLGASWYLLSIERQEACWRSVCDMEEPSCQYGFFDCKRVEDSLRVSWFIASNITILCSPKANFYQFGIYGDAVTSQVTTASFFHKYFFCLWWGLRNLSSLGQGLVTSTYVGEIMFAIVVATFGLVLFALLIGNMQTYMQSTTVRLEEWRVRRSDTEQWMHHRQLPAEIRECVRKYNQYKWVATRGVEEEGLLKGLPADMRRDIKRHICLELVRRVALFDEMEERMVDAICERLKPAVWTEKTYLVREGDPVNETFFIIRGHLDSYTTNGGRSGFFNTCRIGPGDFCGEELLTWALGRGQSFTLPSSTRTVKAISQVEAFSLTAQHLHFVASQFPTLHTKQLIHKFRFYSHHWRTWAACFIQAAWSRYKHRKPHLSPSPPPNS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02655 643 ProSiteProfiles cAMP/cGMP binding motif profile. 478 564 IPR000595 -
Pste1g02655 643 FunFam Cyclic nucleotide-gated ion channel 1 405 469 - -
Pste1g02655 643 Gene3D - 89 402 - -
Pste1g02655 643 Gene3D Jelly Rolls 476 595 IPR014710 -
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 391 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 141 150 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 373 384 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 441 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 258 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 PRINTS EAG/ELK/ERG potassium channel family signature 347 364 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g02655 643 Pfam Cyclic nucleotide-binding domain 500 590 IPR000595 -
Pste1g02655 643 SUPERFAMILY cAMP-binding domain-like 408 602 IPR018490 -
Pste1g02655 643 Pfam Ion transport protein 86 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste1g02655 643 SMART cnmp_10 478 606 IPR000595 -
Pste1g02655 643 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 59 631 - -
Pste1g02655 643 CDD CAP_ED 478 597 IPR000595 -
Pste1g02655 643 SUPERFAMILY Voltage-gated potassium channels 77 400 - -
Pste1g02655 643 FunFam Cyclic nucleotide-gated ion channel 1 476 594 - -
Pste1g02655 643 Gene3D Helix hairpin bin 405 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02655 Pste-Chr1 10358185 10362562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02655 52 632 Ion Channels AT2G28260 75.387 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03191 3 24615646 24619570 Pste1g02655 1 10358185 10362562 PCT