Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02654 GAGAATGAGTGTTGTAGCATAGAAAGGGATATGATGAAGCAAAGTTGTAATGGGTGTCGTATTCTCAGGAAGGGTTGTTGTGAAGAGTGTATTATTAAGCCATGTCTTGAGTGGATAAACTCTCCTAATGCCCAAGCCAATGCTACTCTCTTCCTTGCCAAATTCTATGGCCGTGTTGGCTTGCTCAACCTCATCAATGCTGCCCCTCCACACCTTCGCCCTGTTGTGTTCAAGTCTCTACTGTACGAGTCATGTGGGAGAATTGCGAACCCAACATTTGGGTCTGTGGGCCTATTTTGGACGGGTGAGTGGGCCCAATGCCAAGCTGCCGTTGAAGCTGTGCTAACTGGGTCCCAGATCAATGTTGTGGCGGCTTCGCATTCGCAGGTGACAAGTGGCACAGAGCATGTTTCCCAAATCAATGGCATACGCCACGTGTCCATAGATGATGACGTGGACAGAGAGAAAGGAAAAGTCAAGAAGATGAAGAGGACTGGGAAGGTGATCACGCCGAAGCCGGCGCCGCAAGTGGGTTTGGTCGACTCGGCTGCAATGTGGAAGCTGGCTTCAAGCCGAGAGGCAGGAGGCTCCGACGGTGATAGTGAGGCAACTGTGGAGGCTACGAGCCCAACCAAGCTGAGCCGAAATGGTGGAGCCGAGATTGATTTGGAGCTCACTCTTGGTTAGGCTTCTATGGTTAGTTAAAATGCT 711 0.5077 ENECCSIERDMMKQSCNGCRILRKGCCEECIIKPCLEWINSPNAQANATLFLAKFYGRVGLLNLINAAPPHLRPVVFKSLLYESCGRIANPTFGSVGLFWTGEWAQCQAAVEAVLTGSQINVVAASHSQVTSGTEHVSQINGIRHVSIDDDVDREKGKVKKMKRTGKVITPKPAPQVGLVDSAAMWKLASSREAGGSDGDSEATVEATSPTKLSRNGGAEIDLELTLG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02654 228 MobiDBLite consensus disorder prediction 190 228 - -
Pste1g02654 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 15 226 - -
Pste1g02654 228 ProSiteProfiles LOB domain profile. 14 120 IPR004883 -
Pste1g02654 228 Pfam Lateral organ boundaries (LOB) domain 15 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02654 Pste-Chr1 10351067 10352661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02654 12 227 AS2 family AT3G02550 45.690 9.86e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste1g02654 LOB 8.2e-22 No_clan