Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02636 CTCAAACCTCAGACCTCAAACCTCTCTTCTCATCTCTCATTCCTCATTCCTCGCTCACTTTATTCCCTCACTCACCTTCCTCCCTCCATGTTTATGTTTATGTTTATGTTTGTGTTTATGTTTATGTTTGTGCTTAGGGTTTCTTTACCCTCTCCCAACTTCACACTTTAACCCTATTCCTTCCTTCTACTTCAAGCCCCCCTTTCTCTTTCCCTTTCTTTTCAAACCCTTCCGGATTCTCCCTACTATACAATAAAACCCCGCAATTTGAGCTCAACCCGCGACAAGTGGGGTTCCTTCAAAATTAAATCTTGCAACTAAAAAAGAAGGGACAGTGAGTGGGGTGTGCGGGGTTTGGTTTTATCTTAGCTCACCGTTTCCTGTTTAACATTTTGGAGCCATTCGCTGCAATTTCAATGAAAGAGAGTTTCTTTCTCTCTCTCTCTCTTTGCTTTTATTTTTTATTATCTGAGCTGGTTCCACGGTGAGGAAGCAACCAATAACGGTGGTTGCACAAAAATACATACTTTCTCTGTCCCTATTCGTTTCTCTCCCCTTTAACGTTGCCCCGGTTTCAGTTTTCTCATGTCAAGGGACGCCCTTTACTAGTACCAACAACAATTACCTTCCTTTTCATCCTCCTTATTTTGCTGCCCAGTTGAGAGTGAGTGAAAGCATGGCTATGGCTGTGGCTCAACACAGAGAAAGTAGCAGCAGTGGAAGCATTGAGAAACATCTGGATTCTGGCAAGTATGTGAGGTACACTGCTGAGCAGGTTGAGGCTCTAGAAAGGGTCTATGCCGAGTGCCCTAAGCCCAGTTCTCTGAGGAGGCAACAATTGATCAGAGAGTGCCCCATTCTCTCCAACATTGAGCCTAAGCAAATCAAGGTTTGGTTCCAGAACCGTAGGTGTCGGGAGAAGCAGAGGAAAGAAGCTTCTAGGCTTCAGACTGTGAACCGCAAACTCACTGCAATGAACAAGTTGTTGATGGAGGAGAATGACCGGTTGCAGAAGCAGGTGTCACAGCTTGTGTGTGAGAATGGCTATATGAGGCAGCAATTGCATACTACATCGGCAGCAACTACTGATGCTAGTTGTGATTCGGTGGTTACCACTCCTCAGCATACCATGAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCAGAGGAGACCTTGACAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTAGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCCACGAAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTGGAAGTTTTTACAATGTTTCCTGCTGGAAATGGAGGAGCCATTGAACTTGTTTACACACAGACATATGCTCCTTCAACACTGGCTCCAGCCCGGGATTTCTGGACTCTCAGATATACCACTAGTTTGGAAAATGGCAGTCTTGTTGTTTGTGAGAGGTCCTTGTCTGGTTCGGGTACAGGTCCTAATCCAGCTGCTGCTGCACAGTTTGTAAGGGCTGAAATGCTTCCAAGTGGTTATTTGATTCGACCATGTGAGGGTGGTGGGTCTATCATTCACATAGTAGACCACCTAAATCTTGAGGCATGGAGTGTGCCGGAAGTATTGCGACCACTTTATGAATCGTCAAAGGTGATAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCTCAGGAAACAAGTGGTGAAGTGGTTTATGGATTGGGTAGGCAGCCTGCTGTTCTGCGAACTTTCAGCCAAAGATTAAACAGAGGCTTCAATGATGCTGTAAATGGATTCAATGATGATGGGTGGACTGTTCTCAACTGTGATGGTGCCGAGGATGTAATTATTGCAGTTAATTCAACAAAGAATTTGAGTGGCACTTCTAATCCAGCAAGTTCCCTTACATTCCTTGGAGGAATTCTCTGTGCTAAAGCTTCTATGTTACTTCAAGTTTGGTCTCTGGAAAAATCCTTGGCCAAAGGAAGTTTCTTTGATACATTTGTAAATATGGATCTTGATACCAACTTTAATAAGATAGATGATTCTTCAAATGTTCCTCCTGCAGTTTTGGTTCGTTTTCTGAGGGAGCATCGGTCAGAGTGGGCTGATTTCAATGTTGATGCTTATGCTGCGGCATCACTGAAAGCTGGTACCTATGCCTATCCTGGGATGAGGCCTACAAGATTCACTGGCAGTCAAATAATTATGCCCCTTGGTCATACTATTGAACATGAAGAGATGCTTGAAGTTATTAGGCTAGAAGGCCACTCTCTTGCCCAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAGAATGCTGTGGGGGCTTGTTCGGAGCTCATTTTTGCTCCAATTGATGAGATGTTTCCTGATGATGCTCCATTGGTTCCTTCTGGTTTCCGCATCATCCCACTGGATTCAAAACCAGGTGACAAAAAGGATACAGTTGCTCCAAATCGAACCCTGGATTTGACCTCTGGTTTTGAAGTAGGTCCAGCAACAAATGGTGGTGCAGATGCATCATCAAGTCAAAACACTCGATCAGTGTTGACTATAGCCTTCCAGTTCCCTTTTGACAGCAGTTTGCAAGACAATGTTGCAGTAATGGCACGCCAATATGTCCGTAGTGTGATTTCCTCTGTACAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAATCCTTCTGTTGGAGCAAAACTTTCTCCTGGTTCTCCAGAAGCTGTTACTCTAGCACACTGGATCTGCCAAAGTTATAGGCAAGTCTTTGTATCTTTTTGTTTAACATTTGTCTTAGATTTACTACAAGCATGCTATTGTGTTTGTCATGAGTCAGAACCTGAGTGGATAATAAATTACATGGTTTACCACCATTCAATTTTTTTCTTCTGCCATACTGCTCTTATTAGTGTTTTGACAACTACTTTGGTCAATTACTATTTGGGGTCCGACTTACTGAGATCAGATTCTCTTGTTGGTGACATGATGCTGAAACATCTGTGGCATCATCAGGATGCCATTCTGTGCTGTTCACTGAAGTCATTGCCAGTGTTCATATTTGCAAATCAAGCTGGTCTTGACATGTTGGAAACTACTCTAGTGGCTTTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGCAAGGCATTGTGTACAGACTTTGCCAAGTTAATGGAGCAGGGGTTTGCTTATCTGCCAGCTGGAATCTGTATGTCAACAATGGGACGCCATGTGTCATATGACCAAGCCATTGCTTGGAAAGTGCTTACTGGAGAAGACAACACTGTTCATTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGAAAATCCAATTCGTGTGCCCTGCTTTTCCCCACTTGAATATAAAAATGAAAGGGTTAAAAGGGAGACAGACAAATTTGGAGGGAAAAAGAAATGCTAAATTTTTGTATAACACAGGATCAGGTTTGCATTTAATTCGATTTAATTTATTTCTTATTTAGTGCAGAGACCGAATTGAATTAATCTTGTAAATTATTTAGCGTTAGATTGAAGTTGAGACTTGAATGACACACGTTGAGTACTTTGTTTTTGTC 3729 0.4312 MAMAVAQHRESSSSGSIEKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTTSAATTDASCDSVVTTPQHTMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGAIELVYTQTYAPSTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVIAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLNRGFNDAVNGFNDDGWTVLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQVWSLEKSLAKGSFFDTFVNMDLDTNFNKIDDSSNVPPAVLVRFLREHRSEWADFNVDAYAAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDTVAPNRTLDLTSGFEVGPATNGGADASSSQNTRSVLTIAFQFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGINPSVGAKLSPGSPEAVTLAHWICQSYRQVFVSFCLTFVLDLLQACYCVCHESEPEWIINYMVYHHSIFFFCHTALISVLTTTLVNYYLGSDLLRSDSLVGDMMLKHLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCTDFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSFV 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02636 933 Pfam MEKHLA domain 800 932 IPR013978 -
Pste1g02636 933 SUPERFAMILY Bet v1-like 163 375 - -
Pste1g02636 933 CDD START_ArGLABRA2_like 158 374 - -
Pste1g02636 933 SMART HOX_1 22 88 IPR001356 GO:0003677
Pste1g02636 933 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Pste1g02636 933 FunFam Homeobox-leucine zipper protein REVOLUTA 25 80 - -
Pste1g02636 933 Coils Coil 94 121 - -
Pste1g02636 933 CDD homeodomain 25 85 IPR001356 GO:0003677
Pste1g02636 933 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Pste1g02636 933 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 799 933 IPR044830 GO:0003700
Pste1g02636 933 CDD bZIP 77 116 - -
Pste1g02636 933 Pfam START domain 164 371 IPR002913 GO:0008289
Pste1g02636 933 Gene3D - 198 380 IPR023393 -
Pste1g02636 933 SMART START_1 163 373 IPR002913 GO:0008289
Pste1g02636 933 SUPERFAMILY Homeodomain-like 23 87 IPR009057 -
Pste1g02636 933 Gene3D - 18 91 - -
Pste1g02636 933 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02636 Pste-Chr1 10163278 10169606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02636 1 933 Homeobox Transcription Factor Family AT5G60690 69.506 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste1g02636 START 4.6e-48 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02636 1 10163278 10169606 Pste1g02636 1 10163278 10169606 ECH