Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02627 AAATGAACCTAGAATCCCTCCTCCTTGTTCTGTTCTTTCTGTTGCCCATAATTAACACTTTGGCTTTGAGTGAAAAGTTTGTAGCTTGCAAGCCCAAGACATGTGGTAACACCCAGAAGATAAGCTACCCTTTCTACATTGAAAATACACAAGCTTCTTATTGTGGGCAGCCAGGTTTCCAATTAACGTGTGAAAAGGGTTTTCCAATGCTGAATCTCTTCGATAACAGCTACAGGGTTCACGAAATTGACTATGAGAGCCAAAGGGTTCGACTCTCTAACAAGGCCTTGACGGAACCAAACTGTATTCCTCAGGTGCCGAGCCTGAGGGTGGGGAGGTACAGGTTCCGAGTGGCCCCGAACCAAACGGATCTGTTGCTGTTGTACGGGTGCAACTCAACGGCGTTTCCGGAGCGGAGGATCGGGTGCTATGAGGGGAAGGAAACGAGATGGGTTGTGGCGTTGAAGTTTGATGAGGATGAGGAATTGGGGTTGGCACGGAAGAATTGTAAGGAGGGAGAGGCTAATGTAACAGTGGAAGATGTGAGAGGAGGGGTTGGAGATGCCCTCAAGAGAGGGTTTTGGGTGCTTTGGAACGCTACCAACTGCAACGAATGTGAGACAAGTGGAGGGAGGTGCGGCTTCGACAATGACTACCTCGTCTATGCTTTTAGGTGTTACTGTCCCGATAGACCCCATGCTCTCAGATGTTCCTCAGATAGAAAGGGGTTGAGCGAGGTTGGAAAAGTAGCCATAGGTTTAAGTGCTGCACTTCTAAGCATCTTGATGATTGGGTTGCTCCTATATTGCAAAAGGAAACACAGCTCCTCTAGTGATAAATTCCAAACAAGAAGTACTTATTCTACTCCCTCCTCTCCAAATCCATATACCGAAAATACGAGTGTGTACTTTGGAGTTCCCCTATTCTCCTACAAGGAGCTTGCAGAAGCAACAAACCGTTTTGACCTTAATAAACAAATTGGAGATGGAGGTTTTGGGACTGTCTACTATGGGAAACTGAAAGATGGAAGGGAAGTAGCTGTGAAGCACTTGTATAATCATAACTACAGGCGAGTAGAACAGTTCTTGAATGAAATTCAGATCCTGACACGTTTGCGGCATAGGAATCTTGTGTCACTCTACGGCTGCACTTCACAGCAGAGCCGTGAACTACTGCTTGTGTATGAATACATTCCAAATGGCACAGTTGCCAGCCATCTCCACGGGGAATTGGCAAAGCCTGGCTTACTAACGTGGTCCTTACGAATCAAAATTGCCGTGGAGACTGCTATTGCATTGGCTTATCTTCATGCTTCTAAAATCATCCACCGCGATGTGAAAACTAACAACATTCTCCTTGACAACAGTTTCTGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCAATGACATGACTCATGTCTCAACAGCACCACAAGGGACACCGGGTTATGTTGACCCGGAATATCACCAATGCTACCAGCTAACTAGCAAGAGTGACGTGTATAGCTTTGGAGTTGTGCTCATTGAGCTAATATCATCTATGCCAGCTGTTGATGTGAACAGGCATAAGGATGAAATTAACTTGTCAAATCTAGCCATAAAGAAGATCCAAGAACGTGCACTCACTGATCTGGTTGACCCTTATCTGGGTTTTGATTCAGACAATGAGGTTCAGAGAATGATAGTTGAGGTGGCAGAATTGGCATTTCAATGTTTGCAACATGACAGGGAATTGAGACCTTCCATGGATCAAGTTCTTGAGGTATTGAAGAGAATTGAATGTGGAAAGGGTGAGATAGAAGAAACACATGTTCATGTTTCTGGGGTTTCACATAGTAATGTACAAACCTCACCAGAATTGGAGGAAACTGGACTATTGAAGAATAGGAAGCCACCTTCTTCACCAACATCCGTTACTGATAGTTGGGAAAGTAAATCCACTACGCCTAATGTCAGCTCTTAATCACTTGGCCATGGCTTGTATCATTAGTGTACTTAATTACCAGCCTTCAACACTTATCAGTAAAAAGAAAAAAAAAAAAGGAAGAGTGAATAGCATCATTATCTTGTCATCCACTTGTATAGTTATTAGGATGATTTTTATTAAGCGGCATATTATATAGTCAAGCCAATTTAAATTTGAATATTCAGAATAAAAAAAAATAGTTGTTGATTTTAGAAAA 2193 0.4305 MNLESLLLVLFFLLPIINTLALSEKFVACKPKTCGNTQKISYPFYIENTQASYCGQPGFQLTCEKGFPMLNLFDNSYRVHEIDYESQRVRLSNKALTEPNCIPQVPSLRVGRYRFRVAPNQTDLLLLYGCNSTAFPERRIGCYEGKETRWVVALKFDEDEELGLARKNCKEGEANVTVEDVRGGVGDALKRGFWVLWNATNCNECETSGGRCGFDNDYLVYAFRCYCPDRPHALRCSSDRKGLSEVGKVAIGLSAALLSILMIGLLLYCKRKHSSSSDKFQTRSTYSTPSSPNPYTENTSVYFGVPLFSYKELAEATNRFDLNKQIGDGGFGTVYYGKLKDGREVAVKHLYNHNYRRVEQFLNEIQILTRLRHRNLVSLYGCTSQQSRELLLVYEYIPNGTVASHLHGELAKPGLLTWSLRIKIAVETAIALAYLHASKIIHRDVKTNNILLDNSFCVKVADFGLSRLFPNDMTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSMPAVDVNRHKDEINLSNLAIKKIQERALTDLVDPYLGFDSDNEVQRMIVEVAELAFQCLQHDRELRPSMDQVLEVLKRIECGKGEIEETHVHVSGVSHSNVQTSPELEETGLLKNRKPPSSPTSVTDSWESKSTTPNVSS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02627 656 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02627 656 MobiDBLite consensus disorder prediction 632 656 - -
Pste1g02627 656 FunFam receptor-like protein kinase FERONIA 283 396 - -
Pste1g02627 656 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 650 IPR044652 GO:0004672
Pste1g02627 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pste1g02627 656 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Pste1g02627 656 Pfam Protein kinase domain 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02627 656 Gene3D Transferase(Phosphotransferase) domain 1 397 606 - -
Pste1g02627 656 SUPERFAMILY Protein kinase-like (PK-like) 302 596 IPR011009 -
Pste1g02627 656 Gene3D Phosphorylase Kinase; domain 1 294 396 - -
Pste1g02627 656 Pfam Wall-associated receptor kinase C-terminal 175 229 IPR032872 -
Pste1g02627 656 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02627 656 MobiDBLite consensus disorder prediction 611 625 - -
Pste1g02627 656 FunFam Wall-associated receptor kinase-like 20 397 605 - -
Pste1g02627 656 MobiDBLite consensus disorder prediction 611 656 - -
Pste1g02627 656 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02627 Pste-Chr1 10103341 10108880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02627 21 656 Receptor kinase-like Gene Family AT1G25390 45.783 2.28e-164 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste1g02627 Pkinase 3.7e-50 CL0016