Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02621 AGGATTCTAGGGGGGCGACTAGACATCCTCAACAAGAAAAGGATACGCATGTTTGATAATGACGAGTGCTATAATACACATTTTTCTTCAATTATGTCATTTCATATTTCCTTGATTCTATACTTTGTGCTCCTCATCATCACCCTTTTATCACAAAACTCTTATGGTTCCCTAAACCCAAAGTTTGAATCTTGTGAACCCAAAACATGTGGCAATAACCAAACTATAACCTATCCTTTCTACATTGAAGGGATACAAGAATCCTATTGTGGGTACCCTGGTTTTGGTCTCTCTTGTGGCAATGATGGCTTCCCACTTCTCAACATGTCCAATGCCAAATATATGATCCACCAAATATTCTACAACAACAACTCACTACGTATGTTGAATGCTGTGTTTTCAAGTTCAAACAATAGGAAGAGTTGTTTTCCTCGTACACAGAACCTCACTCTTTCAGGCACGAGGTTGGCTATTGCTTCCAACCAAAGGGAGCTATTCTTGTTGTTCGGGTGTGACCTGCATGGAGGGTTACAAGAGCACAGAATTGGGTGTTATGAGGAAAACAAAACCAGTTCAGTTGTGGCCATGAATAGAGAAGATCAAAAGTTGAGCTTAGCTTTGATGAATTGCAAGGGTGGGGTGGAGAATGTGACAGTGGAGGATGAGGAAGCAGGTATTCAAGAAGCATTGAGAAGAGGGTTCATGGTTACTTGGACAGTCAGTGATTGCAACAAGTGCATAAACAGTGGAGGGAAGTGTGGCTTTGACACAGACATATTCAGTTTCAGATGTTACTGCCCTCATGATACTCATGCTAGGAAATGTTCCCAAGCTTTTGCTATTGCTGGATTTGGAGTTTCAATTATTGCAATATACTGTTTTAGAAGGAATCTATGGTCCACATTCTGGAAGGAGAAATCCAGAGTTAATCGAGATTTTGAGGCCTTCCTAAGAAATTATGGACCACTTGCTGTAAAAAGATATAGTTACTTAGAAATAAAGAAAATGACCAAATCTTTCAAAGAAAAATTAGGCCAAGGAGGCTATGGATGTGTGTTCAAAGGAAAGTTAGAAGATGATTCTATAGTTGCTGTCAAGGTCTTGAATGAATTAAAAGGAAATGGAGAAGAATTTATCAATGAGGTAGCGAGTATTAGCAGGACTTGTCATGTGAACATTGTCACTCTTATTGGATTTTGCCTTGAAGAATCCAAGAAAGCTTTAGTCTATGAGTTCATGGCTAACGGGTCTCTAGAGAAGTTTATATTTGAGACTAATAACTTAACTCATGATTGCCAATTAAATTGTGAAATGTTATATCAAATTGCAGTTGGTGTTGGTCGAGGACTGGAGTACTTGCATAGAGGATGCAATACTCGAATCTTTCATTTTGACATAAAGCCTCACAACATACTCTTGGATGAGAATTTTTGTCCAAAGATATCAGATTTTGGATTAGCTAAAATATGTCCTGGAAATGAAAGTGTTGTGTCTATGATAACTGCTAGAGGAACTATAGGGTATATTGCTCCAGAGGTGTTTTGCAGAAATATTGGAGTTGTATCACACAAATCAGATGTTTATAGTTATGGAATGATGATGTTAGAAATGGTGGGAGGAAGAAAGAATATTAATGTTGAAGTTGATGGTACAAGTGAAATATACTTCCCTTATTGGATTTACAAGCATTTAGAACATAATCAGGAGCTTGCACTAAGAAATGTTATGAATGAAAGTGACAAAGACATAATAAAAAAGATGGCATTAGTAAGTTTGTGGTGTATACAAACTGACCCTTCGAACCGTCCTACAATGCATAGGGTGGTGGAGATGCTAGAAGGGAATGTTGAAACAATACAAGTACCACCAAAACCTTTCTTATCATCATCCCCTTCAAGATCACCACACACTTTTCCCTCTAGTTGA 1926 0.3801 RILGGRLDILNKKRIRMFDNDECYNTHFSSIMSFHISLILYFVLLIITLLSQNSYGSLNPKFESCEPKTCGNNQTITYPFYIEGIQESYCGYPGFGLSCGNDGFPLLNMSNAKYMIHQIFYNNNSLRMLNAVFSSSNNRKSCFPRTQNLTLSGTRLAIASNQRELFLLFGCDLHGGLQEHRIGCYEENKTSSVVAMNREDQKLSLALMNCKGGVENVTVEDEEAGIQEALRRGFMVTWTVSDCNKCINSGGKCGFDTDIFSFRCYCPHDTHARKCSQAFAIAGFGVSIIAIYCFRRNLWSTFWKEKSRVNRDFEAFLRNYGPLAVKRYSYLEIKKMTKSFKEKLGQGGYGCVFKGKLEDDSIVAVKVLNELKGNGEEFINEVASISRTCHVNIVTLIGFCLEESKKALVYEFMANGSLEKFIFETNNLTHDCQLNCEMLYQIAVGVGRGLEYLHRGCNTRIFHFDIKPHNILLDENFCPKISDFGLAKICPGNESVVSMITARGTIGYIAPEVFCRNIGVVSHKSDVYSYGMMMLEMVGGRKNINVEVDGTSEIYFPYWIYKHLEHNQELALRNVMNESDKDIIKKMALVSLWCIQTDPSNRPTMHRVVEMLEGNVETIQVPPKPFLSSSPSRSPHTFPSS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02621 641 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pste1g02621 641 Gene3D Phosphorylase Kinase; domain 1 318 412 - -
Pste1g02621 641 MobiDBLite consensus disorder prediction 622 641 - -
Pste1g02621 641 FunFam PR5-like receptor kinase 413 624 - -
Pste1g02621 641 Gene3D Transferase(Phosphotransferase) domain 1 413 621 - -
Pste1g02621 641 SMART serkin_6 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02621 641 Pfam Wall-associated receptor kinase galacturonan-binding 65 128 IPR025287 GO:0030247
Pste1g02621 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pste1g02621 641 FunFam S-receptor-like serine/threonine-protein kinase 307 412 - -
Pste1g02621 641 ProSiteProfiles Protein kinase domain profile. 338 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02621 641 Pfam Protein kinase domain 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02621 641 SUPERFAMILY Protein kinase-like (PK-like) 319 613 IPR011009 -
Pste1g02621 641 PANTHER RUST RESISTANCE KINASE LR10-RELATED 310 630 IPR045874 GO:0004672
Pste1g02621 641 Pfam Wall-associated receptor kinase C-terminal 198 267 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02621 Pste-Chr1 10064769 10071614 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02621 32 636 Receptor kinase-like Gene Family AT5G38260 38.315 1.67e-138 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste1g02621 Pkinase 1.5e-46 CL0016