Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02620 TATGTATATGTTATATGGCGTGGGGGCATGCAAGCTAAGATTAAGAGTAAGAGGGGCGGCAAAAAAATATGTTAATCATGTCATTGTCATCCATACACATAGTTAATTATCACCATAGTCTCTCTTTCTTTCATTACTTAAATACCCCATCTTTGTACTTAATCCCTCAATCGACTCCACTTTGGCACACACACAAGTAGTATAGTGGTAGTGAGAAATGGCTAAGGATGTTGAAGTTCAAGAGCAAGGAGAGTATTCGGCCAAAGACTATCATGATCCTCCTCCACCACCCTTGTTCGACCCAGAGGAGCTCACACAGTGGTCCTTCTATAGAGCCCTCATAGCCGAGTTCATAGCAACCCTTCTCTTCCTTTATGTTACGGTGCTAACCATTATTGGCTACAAGAGGCAGACTGATCCCAACATGAAAGGCACTGAATGTGATGGGGTTGGCATTTTGGGCATAGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCCGGTATTTCAGGAGGACACATAAACCCGGCGGTGACATTCGGGTTGTTCCTAGGACGCAAGGTGTCGTTGATAAGGGCGTTGTTGTACATGGTAGCACAGTGTGCCGGTGCTATCTGTGGCACTGGACTGGCCAAGGGGTTCCAAAAATCATACTACAACAGGTATGGAGGTGGTGCTAACTTTGTTGCAGATGGCTACAACAAGGGTACTGCTTTGGGTGCTGAGATTATTGGTACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGACCCCAAGCGGAACGCTAGGGACTCCACGTTCCTGTTCTGGCTCCACTACCTATTGGATTTGCAGTCTTCATGGTTCACTTGGCTACAATCCCAGTTACCGTGGATATTCTGGGTTGGACCAATTGTTGGAGCAGCAGTGGCTGCACTCTACCACCAATACATCCTTAGAGCAGCAGCTATAAAGGCTCTTGGATCCTTCAGGAGCAATGCTTAA 1000 0.467 MAKDVEVQEQGEYSAKDYHDPPPPPLFDPEELTQWSFYRALIAEFIATLLFLYVTVLTIIGYKRQTDPNMKGTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGTGLAKGFQKSYYNRYGGGANFVADGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSTFLFWLHYLLDLQSSWFTWLQSQLPWIFWVGPIVGAAVAALYHQYILRAAAIKALGSFRSNA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02620 260 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Pste1g02620 260 Gene3D Glycerol uptake facilitator protein. 24 260 IPR023271 -
Pste1g02620 260 SUPERFAMILY Aquaporin-like 30 246 IPR023271 -
Pste1g02620 260 MobiDBLite consensus disorder prediction 1 16 - -
Pste1g02620 260 Pfam Major intrinsic protein 31 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 CDD MIP 39 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 200 IPR034294 -
Pste1g02620 260 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g02620 260 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02620 Pste-Chr1 10062733 10064133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02620 1 258 Major Intrinsic Protein MIP AT5G60660 65.018 5.22e-127 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03214 3 24843716 24845340 Pste1g02620 1 10062733 10064133 PCT