Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02605 TGGACTTCAAATTTATGAGCATTCGAATGCATGTCGTTTTCGTCATTATATGTCAACGAAACCTGCTAGATTGTTATAAACTGGAATTATCATCAAAATGTTTTATGTGAGTCGTAGTAGTGGGTTTTATATCTGTAGTTGTGTTCTCTACCTAGCTGAGTGGCACCCATTGGATGGAATAGCAACGTTGAGTAGGGCTTGAAGCCCTCTGAGATAAAATTTTTAAAATTTTTAGGTTGATAGATTCATCAATCACCGTTAGGGTCGAAGCCCCAGATGTTCAATAAGACACTTTGTTTTACCAATGCAATGGGGTGCTGCAGTTGCTTTGGATTTACCAGGACACCGAACCATCAAAGTCAAAGGTCTAAGCCTACCACTAACAATAATCTCTGCCAGGAGCCTCTGTTGGATGTTGACATTGAAGATGAAGAGGGTGAGCTTTTGTACAATGATGAGATTACTAACACTAGTGGAGATGATGGTGTGGAGGAAACTCGTCCCAAGCGATCAGAGGAAATTTTGAACTTGAGAGTAGAGAATGACATGATTTGTAGGCAGATTCCTGTTAAAGAGACTAACAAAGTTGTTCGGTCGGAGGATGAAAATGGAAACAAGATGATAAATGAGTATATTCGTGAGTGTAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATCGAAGCTCTATTGATGGAAAGCATTATGCAATTAAGGTAAGGAAACATCTTGGTGTGAGTAGACAGATTACTGTAGGAAACATGGTTGTAGGAGCCTTTCTTAAATCTCATTTACTGAAGCTTCGAGTTGCACCTTCAGAAACTGCCATGACTGATGTACTACAGGAGGTTCTCATTATGAAAATGCTGGAACATCCTAATATGGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCACTTCTACATGGGTACTGTACTTGAATATGTGGAAGGCAAATGGGTATGTGAGGGTTCTGGGTTAGGTGAAGAGACTGCTCGAAGATACATGCGTGATATAGTTTCTGGGTTAACATATCTTCATGCTCATAATATAATACATGGGGATATTAAACCAGATAATCTGTTGATTACCTGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTTAGCCAGGCATTTGAGGATGATAAAGATGAGCTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTATTTCAGGTTGTTATGTGAACTATGGAGGTAAAGCTGCAGACACGTGGGCAGTAGAAGTTACTTTATACTGTATGATATTGGGCAAATACCCTTTTCTTGGAGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTTTAGTACTCCCCAATGATATGACTCCGCCATTGAAGAACTTAATAGAAGGGCTACTTTCAAAAGACCCAAGACTAAGGATGACTTTGGGTGATGTTGCGGAAGATAGTTGGGTTATTGGAGATAATGGGCCACTTCCTAAATACCTCTGTTGGTGCAAAAGGAAGAGCTTCGGAATTAAAGACAATAATGAGAGCAATACGGACTAAATCTAGTTTACATTTATGTACAGTTGAGAAGTGTTAAAAAAAAATCCCCGTTAAACTCTTCTATGGTACGGTATGATTATACAGAGCCAGGCTTGAAATCTCAAGTTAAGAAAATATGGCTCCTGTAGGCATGACGAGTAGCAGAGGCAGAAAAATTTTAGTTTATTTTTTTGTCAGAGATTTTGGCGTCTAGAAGTAGAAATTGAGGCCTTGTATCCAACTTATGCTTAATTTAATCTTTTGCATGTATTATACCCAGG 1826 0.3927 MFNKTLCFTNAMGCCSCFGFTRTPNHQSQRSKPTTNNNLCQEPLLDVDIEDEEGELLYNDEITNTSGDDGVEETRPKRSEEILNLRVENDMICRQIPVKETNKVVRSEDENGNKMINEYIRECKIGSGSYGKVALYRSSIDGKHYAIKVRKHLGVSRQITVGNMVVGAFLKSHLLKLRVAPSETAMTDVLQEVLIMKMLEHPNMVNLIEVIDDPESDHFYMGTVLEYVEGKWVCEGSGLGEETARRYMRDIVSGLTYLHAHNIIHGDIKPDNLLITCHGTVKIGDFSVSQAFEDDKDELRRSPGTPVFTAPECISGCYVNYGGKAADTWAVEVTLYCMILGKYPFLGDTLQDTYDKIVNNPLVLPNDMTPPLKNLIEGLLSKDPRLRMTLGDVAEDSWVIGDNGPLPKYLCWCKRKSFGIKDNNESNTD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02605 429 SMART serkin_6 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02605 429 Gene3D Transferase(Phosphotransferase) domain 1 233 406 - -
Pste1g02605 429 CDD STKc_LKB1_CaMKK 125 399 - -
Pste1g02605 429 FunFam Serine/threonine-protein kinase GRIK1 isoform A 235 406 - -
Pste1g02605 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Pste1g02605 429 Pfam Protein kinase domain 185 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02605 429 Gene3D Phosphorylase Kinase; domain 1 106 226 - -
Pste1g02605 429 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 80 401 - -
Pste1g02605 429 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pste1g02605 429 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02605 429 SUPERFAMILY Protein kinase-like (PK-like) 114 409 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02605 Pste-Chr1 9961451 9967669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02605 125 398 CBL-interacting serine-threonine protein kinases AT5G35410 30.216 1.36e-35 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pste1g02605 Pkinase 2e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02605 1 9961451 9967669 Pste1g02605 1 9961451 9967669 ECH