Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02603 AGACATCGAACTCAACTAGTAAGGTGTTTAGTGGGTTACACCGGTAAGATGACATGTTACATTGGGAAGGACCTCATTCATTATAAAGTTATTGATCCTAATTATGATCCTATAAACCCCAAACTTGCTACCTTGAGGTATGGAACTTTTGTGATTCAAGGTAAAGTATGGATCACATTTCAAAGAGACATGCACATTAAACTTAAAAGACCCCTTCTTATAAGTAGTTTCACTACCATTAATGGTCGTGTCATTAATGCCACTAATGTAATTATCCATGACATTCGAGTTCATCATTGCAAACCCCAAGCCCCAAGGGTTGTGATAGGATTAGAAGGAAATTTGATTCATTTGGGCCATGTAGATGGGGATGCAATAAGATTGATTCGACATGGATATGCACAAGTAGCCAACAATCTTTACTTAGGATGGGTGCAATATGCCATTTGTGGAAGCATGGAACCTAGCCTCAAAAGTGAAGCTAACCTTTTTATAGTACCAACAACAAGGAGTAAGGAGATGATTCTCATCCTTATCATAAATATGATCATTATTGCAACTACTATTATGATTGTTGTCATTCCCATCATTGCAATGGCTACTATAATTATGGTGACCATG 621 0.372 RHRTQLVRCLVGYTGKMTCYIGKDLIHYKVIDPNYDPINPKLATLRYGTFVIQGKVWITFQRDMHIKLKRPLLISSFTTINGRVINATNVIIHDIRVHHCKPQAPRVVIGLEGNLIHLGHVDGDAIRLIRHGYAQVANNLYLGWVQYAICGSMEPSLKSEANLFIVPTTRSKEMILILIINMIIIATTIMIVVIPIIAMATIIMVTM 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02603 207 Gene3D - 1 128 IPR012334 -
Pste1g02603 207 PANTHER PECTATE LYASE 18-RELATED 2 128 IPR045032 GO:0030570
Pste1g02603 207 SUPERFAMILY Pectin lyase-like 39 168 IPR011050 -
Pste1g02603 207 Gene3D - 129 181 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02603 Pste-Chr1 9935468 9936640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02603 117 175 Polysaccharide Lyase AT5G09280 52.542 1.13e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02603 1 9935468 9936640 Pste1g02603 1 9935468 9936640 ECH