Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02602 ATGGATACGAGCGTGGACAATCCCGTAGAATCGCCAATTCTGTTAATGTGTCTGTTCCAGAAAGCAATAATCTCAGAGTTGAAGTTGCTGCACCTAACGGCTTTCGATTTCGTTTCCGATCCACACTCCCTCCTCAAATCCTTCTCCCATCGTTGCCACTTTCTTCGCACTCTCTACAAGCACTACTGCAATGCCGAGGACCAGGTTATATTTCCTGCCTTAGATAAACGAGTGAAGAATGTTGCACACACCTATTTTTTGGAACACGAGGGAGAGGGTCTTCTTTTTGATCAATTGTTCAACTTGCTAAATTCCAATTTGCTACATGAAGAGAGCTATCGAAGAGAATTAGCTTCTAGTGTTGGAGCCCTTCGAACATCAATTAGCCAGCATATGTTTAAGGAAAAGGAACAGGTATTCCCTTTGGTTATTGAGAATTTTTCATCTGAAGAGCAGGGTTCGTTGGTATGGCAATTTCTTTGTAGCATACCGGTCAAAATGATGGCAGAATTTCTTCCCTGGCTAGCTTCATATGTATCATCTGATGAGTATCAAGGTTTGCTTAGGAGCTTGTGCACAATAATTCCCAAAGAGAAGCTTCTTCATCAGGTAAGTTTTCTGTATATTGCATGCTGTAACTGGATGCTTTATCAGAATGAAGTTTTCAACTTCAATTTGCTTGATGACAAGGTAATCTTTGGATGGATGGAAGGACTAAAGATTAAACATAGAAACGGCACGAGTGATGACAAGGTTCAATGGCAGGATGTTGGTATGAGCACCTTACTCAGTCATAATGAAAAGGTGTATCGTAATTGTGGACCTTCCAAAACTGTCAAAAGGAAGTGGTTGGAGCTAAATGAAGATCCTACTAATACCACTATATCATGCCCTTTAGATGAATTGTTACTTTGGCATAAGGCTATAAAGCAAGAATTGAGTGATTTAGCTGACACAGCTAGGAAGATACAACTATCTGAAGAATATTCTGATTTGTCTTCATTTAGTGGGAGGCTGCAATTTATAACTGAAGTCTTCATCTTCCATAGCATTGCTGAGGATAGAGTTATATTCCCTGCTATTAAAGCAGAGTTGTATTTTCTCCAAGACCACACAGATGAAGAACTTCAGTTTGGCAACCTTAGGTGTCTGGTAGAAAGTATCCAAACTGCTAGAGCTGACTCATCTTCTGCTGAATTTTATATTAAGTTGAGCTCCCATACTGAGCAAATCATGGATACCATACTGAAGCACTTTGAAGATGAGGAAGCTCAGGTACTTCCACTTGCACGAAAACTATTTAGCCCCCAAAGACAACGAGAATTACTGTACGAAAGCTTGTGCTCAATGCCCTTGAAATTGATTGAATGTGTGTTACCATGGCTGGTTGGATCACTTAATGAAACTGAAGCTAGATCATTTCTTAAGAATATGTATATGGCAGCCCCAGCTACAGATCATGCATTGGTTACACTTTTCTCTGGTTGGGCATGCAATGGATATTCTAGACACAGTTGCTTCTATTCAAGCGCAACAGGTTTATGTCCTGACAAGGGACTGATGGAAATATCATTTTGCATGTGTGAACCTTCATTCAATCACAATGAAAAATCTTCACCCATTCAACAAGATGATGTTAATGGCAGTATTGAACCAATCAGGCATGGAAAACCTGAATCAAGGCAAGCCAATGATGTTGCTAACCTGATAGTAACTGGAAAAACCCTCAACTCACCTCATAATCAGTTTTGTTGTGTCCGTGGATTATGGGAGAATGCAAGTAATCAAGGGCTCGGTTCTTTGGCCCTGACAAAGTCTCTTCGAGGACTATCTGATGATCCATCTGCACCTTCCCTCAATTCCAGTCTTTTTATGTGGGAAACCAATTTAATATCTTCTGGCAATCAATGCATTATACGGCCTATTGATAACATATTTAAATTTCACAAAGCCATACATAAAGATTTGGAGTATTTAGATGTTGAATCTGTAAAACTTAATGATTGTGATGAGATTTTCATTCATCAATTCACTGGTAGATTTTGCTTGTTGTGGGGTTTATATAGAGCTCATAGTAATGCCGAGGATGATATAGTATTTCCAGCATTAGAATCAAAAGATAATCTTCACAATGTGAGCCATTCTTACACTTTGGATCATCAGCTGGAAGAGAAGTTATTTTTGGATATCTCTTCTGGACTCACTCAATTACATGAATTGCTATATAAAAGGAATCCATCTGATCATCTAACCAATGGTTACTCTAATTATGCCAGTTGCTCTGATACTGGTACAATACAAAATTACAATGAGCTCTCTACAAAGATTCAGGGCATGTGCAAATCTATCAGAGTGACACTAGATCAACATATCCACAGGGAGGAACTTGAATTATGGCCATTGTTTGATAGACACTTTTCGGTGGAAGAACAGGATAAAATTGTCCGTCATATAATTGGTACTACAGGGGCAGAAGTTCTTCAGTCTATGCTGCCGTGGGTAACTTCTGCTCTCACACCAGATGAGCAAAGCAAAATGATAGATACATTGAAACAGGCAACCAAAAACACTATGTTTAGTGACTGGCTTAATGAATGGTGGAAAGGACCTGCTTTATCTTCAAATATGACAATACATGGACATCATTCTTTAGGTACTGATACCTATGAAGATTCAGAGGAAAGCTTTCAAGCTTTCCGACCTGGATGGAAAGATATATTCAGGATGAACCAGAACGAACTTGAATCAGAGATAAGAAAAGTTTCTCAAGATTTAACTCTTGATCCAAGAAGAAAATCATATCTTATTCAAAATCTAATGACCAGTCACTGGATAGCTTCTCAGCAGAAGTTGTCTCAATCATTACAAGGTGAATCTTCAAAGGGAGAAGATTTATTGGAAACGTCCCCTTCGTTTCATGATCCAGAGAAAAAAATCTTTGGTTGCGAGCATTACAAAAGAAATTGTAAAATCCGTGCTGCTTGCTGTGGAAAACTATACACATGCCACTTCTGCCATGACAAAGTTAGTGACCATTCAATGGATAGGAAGGCTACAACTGAGATGATGTGCATGCACTGCCTGCAAATACAGCCGGTTGGACCAGTTTGTGCCACACCTTCCTGTGCCAGCCTCTTAATGGCAAAGTACTACTGTAGCTTTTGCAAACTATTTGACGATGAAAGGAATGTTTATCATTGTCCTTTCTGCAATCTATGCCGTCTGGGAAAGGGACTTGGTGTTGACTTCTTTCACTGCATGCAATGTAATTGTTGCTTGTCAATGAAACTGATTGATCACATATGCCGGGAAAAGGGTTTAGAAACAAACTGCCCCATCTGCTGTGATTTTTTGTTCACGTCCAGTGCATCTGTCAGAGCTCTCCCTTGTGGCCATTTCATGCACTCTGCCTGCTTTCAAGTCATCATCATGCATACACATGCAGTCACTACATCTGTCCAATTTGTAGCAAATCTATGGGAGATATGTCGGATATACTTTGCAATGACTGCCATGAGAAGGGTACTGCACCATTTCATTGGCTATATCATAAATGTGGGTTTTGTGGATCTTACAACACAAGGGTAATTTGAAGTAATAAAGTCAATTGCTCTAATATCAAACTTGCGATGGACTCTGCCTAAACTGGATTTTGTATGAATAAAATATGTGCATTGAAATATTGTTAGATTTTGTTTTTAAAAGTAATTGCTGTAAATAATTTTTTCCTTTATTTTTGTTCCTTCATGTTATCTAGTACTGTAGTTGACGTTCAACAAGCCCCGTATCCCGTTGGGTAATAATGTAAGCTATACAGATTGCATAACATTGGTTAAAGACCAAATCTTTATAAATTCTTCACCAAATTCTGCATAACAACTTTTTCGTTGATGTAAGCATACAAATTCCATCTCCCACAATACTTATGTTTAGATGGAAAATTTTAACAGGAAAATTTATTTTGTTTAAAAATTTCAAATGATCTTGATTGTCCAAGAAGAGAATCGTAAAAAAATTTGAAATTCTAATCTT 4032 0.3837 MDTSVDNPVESPILLMCLFQKAIISELKLLHLTAFDFVSDPHSLLKSFSHRCHFLRTLYKHYCNAEDQVIFPALDKRVKNVAHTYFLEHEGEGLLFDQLFNLLNSNLLHEESYRRELASSVGALRTSISQHMFKEKEQVFPLVIENFSSEEQGSLVWQFLCSIPVKMMAEFLPWLASYVSSDEYQGLLRSLCTIIPKEKLLHQVSFLYIACCNWMLYQNEVFNFNLLDDKVIFGWMEGLKIKHRNGTSDDKVQWQDVGMSTLLSHNEKVYRNCGPSKTVKRKWLELNEDPTNTTISCPLDELLLWHKAIKQELSDLADTARKIQLSEEYSDLSSFSGRLQFITEVFIFHSIAEDRVIFPAIKAELYFLQDHTDEELQFGNLRCLVESIQTARADSSSAEFYIKLSSHTEQIMDTILKHFEDEEAQVLPLARKLFSPQRQRELLYESLCSMPLKLIECVLPWLVGSLNETEARSFLKNMYMAAPATDHALVTLFSGWACNGYSRHSCFYSSATGLCPDKGLMEISFCMCEPSFNHNEKSSPIQQDDVNGSIEPIRHGKPESRQANDVANLIVTGKTLNSPHNQFCCVRGLWENASNQGLGSLALTKSLRGLSDDPSAPSLNSSLFMWETNLISSGNQCIIRPIDNIFKFHKAIHKDLEYLDVESVKLNDCDEIFIHQFTGRFCLLWGLYRAHSNAEDDIVFPALESKDNLHNVSHSYTLDHQLEEKLFLDISSGLTQLHELLYKRNPSDHLTNGYSNYASCSDTGTIQNYNELSTKIQGMCKSIRVTLDQHIHREELELWPLFDRHFSVEEQDKIVRHIIGTTGAEVLQSMLPWVTSALTPDEQSKMIDTLKQATKNTMFSDWLNEWWKGPALSSNMTIHGHHSLGTDTYEDSEESFQAFRPGWKDIFRMNQNELESEIRKVSQDLTLDPRRKSYLIQNLMTSHWIASQQKLSQSLQGESSKGEDLLETSPSFHDPEKKIFGCEHYKRNCKIRAACCGKLYTCHFCHDKVSDHSMDRKATTEMMCMHCLQIQPVGPVCATPSCASLLMAKYYCSFCKLFDDERNVYHCPFCNLCRLGKGLGVDFFHCMQCNCCLSMKLIDHICREKGLETNCPICCDFLFTSSASVRALPCGHFMHSACFQVIIMHTHAVTTSVQFVANLWEICRIYFAMTAMRRVLHHFIGYIINVGFVDLTTQG 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02602 1195 CDD Hr-like 15 141 - -
Pste1g02602 1195 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 684 1148 - -
Pste1g02602 1195 SUPERFAMILY Zinc hairpin stack 1048 1103 IPR037275 -
Pste1g02602 1195 CDD Hr-like 645 800 - -
Pste1g02602 1195 Pfam Hemerythrin HHE cation binding domain 298 430 IPR012312 -
Pste1g02602 1195 CDD Hr-like 300 428 - -
Pste1g02602 1195 ProSiteProfiles Zinc finger CTCHY-type profile. 1047 1110 IPR017921 -
Pste1g02602 1195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1106 1149 IPR013083 -
Pste1g02602 1195 ProSiteProfiles Zinc finger CHY-type profile. 975 1044 IPR008913 GO:0008270
Pste1g02602 1195 FunFam Zinc finger protein BRUTUS 636 865 - -
Pste1g02602 1195 FunFam Zinc finger protein-related isoform 1 1106 1149 - -
Pste1g02602 1195 Gene3D nmb1532 protein domain like 639 863 - -
Pste1g02602 1195 Pfam CHY zinc finger 982 1057 IPR008913 GO:0008270
Pste1g02602 1195 SUPERFAMILY CHY zinc finger-like 974 1038 IPR037274 GO:0008270
Pste1g02602 1195 Gene3D nmb1532 protein domain like 302 445 - -
Pste1g02602 1195 Gene3D nmb1532 protein domain like 20 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02602 Pste-Chr1 9934897 9946835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02602 639 852 C2H2 Transcription Factor Family AT3G18290 27.570 7.26e-17 84.7