Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02597 ATGGCATCATCACCCCTTTCCCCTCACCACCTCCTCCTCGCCACCTTCATCTCCCTCTCATTTCACCTCTCTTTAACTCTCTCTCTGAGCCCAGACTTCTACCCCTTAATCTCCTTCAAAGCCGCTTCCGACCCTTCCAACAAACTCTCCCAATGGAACTCCACTAGCCCCGACCCTGCTCCTGGCACGGCGTGTCGTGCCTCCCCCGCAACCGCCGTGTCTCCGCCATTCCTCAAAGCCAACCGTTTCCATGGCCCCCTCCCCCTCCCTCCTCCTCTCCTCCCTCCACTCCTCTACCTCAACCACAACCACTTCTCCGGCCCCCTCCCCTCCCTCACCGCCCTCACCCGCCTCTTCCGTCTCGACCTCTCCCACAACTCCCTCTCAGGCCATTCCCTCTCCCTCAACCGCTTCTCCCGCCTCCTCACCCTCCGCCTTCACTTGAACAACTTCCACGGCCATCTCCCCAACCTCAGCCTCCCCAACCTTGTCGACTTCAACGTTTCCTCCAACCATCTCTCCGGTCCCATTCCCCTTTCTCTCTCCTCTTTCCCCCAATCCGCCTTCTCCCACAACTCCCCCTCCCTCTGCGGCCCTCCCCTGACACAATGCACACACAAGGCCATTCCCGTCCTCGCTTCCCCGCTAAACCCGCGTAACGACACCGTTTTCAGTCCCCAGCGCCGCACTCCCAAGCTGGGACTCATGCTCCTCCTCCTCATCGTTCTCGCTGACCTCTTGGTTCTCGCTTTCGTCTCGCTTCTTCTCTACTGCTATTTCTGCCGAAAACGGAACCACTCCGGGGAGGGGAAAGAGGTTAGGGATTCAAAGGAGAGAGGGGAAGACAGCCAAATGGTGTTTTTCGAAGGGGAGAAGAGGTTTCAGTTGGACGACTTGCTCCGGGCCTCCGCCGAGATGTTGGGGAAGGGCGTGTTTGGGACGGCCTACAAAGCGGTGCTCCATGACGGAACCCTTGTTGCGGTCAAGAGGATCAAGGAGGTCTCTGTAGGAGGAAAAAGAGAATTTCACCAGCGAATGCAAGAGCTCGGAAGCTTGAGGCATTGCAATCTCGTTGCTTTCAGAGCTTACTATTTCGCCAAACATGAAAAGTTGCTCGTCTCTGATTACATGCCCAATGCTAGCTTGTCCTACCTTTTACACGGTAACAGAGGACCGGGAAGGACCCCACTGGATTGGAGCAGCAGGGTTAAGCTGGCAGGTGGAGCGGCACGAGGTGTGGCCTTCCTTCACGACAATAAAGTCACCCACGGTAACATCAAATCCACCAACGTCCTCGTCGACGTGGCGGGCAACGCGCGCATCGCCGATTTCGGCCTCTCCATCTTCGCCGCCCCCACCACACCCAACGCCTACCGTGCTCCGGATGCTCGCAAACACACCCACATGTCTGACGTCTACTCCTTCGGCGTTCTCCTCCTCGAGATTCTCACCGGCAAGTGCCCCTCCGCCGAGGCCCCCGACCTTCCTCGCTGGGTCCGCTCGGTGGTGAGGGAGGAGTGGACGGCCGAGGTCTTCGATCTTGAGTTGATGAGCTACCGGGACGTTGAGGAGGAGATGGTGGCCATGTTGCACATAGCCATAGCCTGCACTGCCACTGCACCAGATCAACGACCCACCATGAGCCACGTCGCCAACATGATCCAGGACTTGCGTCCTGCTGGGACCCGGACTCAATCATTCAATTAA 1707 0.5817 MASSPLSPHHLLLATFISLSFHLSLTLSLSPDFYPLISFKAASDPSNKLSQWNSTSPDPAPGTACRASPATAVSPPFLKANRFHGPLPLPPPLLPPLLYLNHNHFSGPLPSLTALTRLFRLDLSHNSLSGHSLSLNRFSRLLTLRLHLNNFHGHLPNLSLPNLVDFNVSSNHLSGPIPLSLSSFPQSAFSHNSPSLCGPPLTQCTHKAIPVLASPLNPRNDTVFSPQRRTPKLGLMLLLLIVLADLLVLAFVSLLLYCYFCRKRNHSGEGKEVRDSKERGEDSQMVFFEGEKRFQLDDLLRASAEMLGKGVFGTAYKAVLHDGTLVAVKRIKEVSVGGKREFHQRMQELGSLRHCNLVAFRAYYFAKHEKLLVSDYMPNASLSYLLHGNRGPGRTPLDWSSRVKLAGGAARGVAFLHDNKVTHGNIKSTNVLVDVAGNARIADFGLSIFAAPTTPNAYRAPDARKHTHMSDVYSFGVLLLEILTGKCPSAEAPDLPRWVRSVVREEWTAEVFDLELMSYRDVEEEMVAMLHIAIACTATAPDQRPTMSHVANMIQDLRPAGTRTQSFN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02597 568 ProSiteProfiles Protein kinase domain profile. 301 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02597 568 MobiDBLite consensus disorder prediction 45 61 - -
Pste1g02597 568 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 558 IPR046959 -
Pste1g02597 568 MobiDBLite consensus disorder prediction 45 66 - -
Pste1g02597 568 SUPERFAMILY Protein kinase-like (PK-like) 305 554 IPR011009 -
Pste1g02597 568 Gene3D Transferase(Phosphotransferase) domain 1 377 566 - -
Pste1g02597 568 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Pste1g02597 568 Pfam Protein tyrosine and serine/threonine kinase 305 552 IPR001245 GO:0004672|GO:0006468
Pste1g02597 568 FunFam pollen receptor-like kinase 1 271 376 - -
Pste1g02597 568 Gene3D Ribonuclease Inhibitor 36 206 IPR032675 -
Pste1g02597 568 SUPERFAMILY L domain-like 98 187 - -
Pste1g02597 568 Gene3D Phosphorylase Kinase; domain 1 267 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02597 Pste-Chr1 9894743 9898676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02597 32 568 Receptor kinase-like Gene Family AT1G68400 50.971 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste1g02597 PK_Tyr_Ser-Thr 1.3e-31 CL0016