Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02596 ATGGCTGTTTTCTTTCCTTTTGTTCTTTTCCGTTCTCAGATTCTTTGTCTTGCACTCATGTTGCTTTTCACTAATATCGCAGCTCAATCACAACAGACCAGTGGAGCAAACTTTTCATGCCCTTCCGATTCACCTCCTTCCTGTGAAGCCTATGTAACATACAAAGCTCAATCTCCAAAATTTTTGAGTCTAACCAGTATATCCAATATATTTGACACCAGTCCTTTATCCATTGCAAGAGCCAGTAACTTAGATCATGAGGAAGACAAGCTGATCCCAGGCCAAGTCTTACTGATACCAGTAACCTGTGGTTGCACTGGAAACCGCTTTTTCGCCAATATCTCCTATGAGATCAACCAAGGTGATTACTTCGACTTTGTTGCAACTACGTCATACGAGAATCTCACGAATTGGCGTGTAGTGGTGGATTTAAACCCCAGTTTAAGTCCAAATACGTTGCCAATAGGCATCCAAGTGGTATTTCCTTTATTCTGCAAGTGCCCTTCAAAGAACCAGTTGGATGAAGGGATAAAGTACCTGATTACTTACGTGTGGCAGCCCAGAGATAATGTTTCCCTTGTAAGCGACATGTTTGGTGCATTACCAGAGGACATACTGAGTGAAAACAACTATGGTCAAAACTTCACTGCTGCAAGCTACCTTCCAGTTTTTATCCCAGTGACACGCTTGCCAATTCTTGTTCAATCTCCTTCAAATGGAAGAAAAGGTGGAATTCGTCTTCGGGTTATAATTGGTATTAGCCTGGGATGCACACTTCTGGTTGTTGTTTTAATATTATTAGTGTATCTATATTCTCTGAAAATGAAGAGTTTGAATAGGAATGCTTCATCAGCAGAAATTGCAGATAAGCTACTTTCTGGAGTTTCAGGTTATGTAAGTAAGCCTACAATGTATGAAACAGACGCGATCATGGAAGGTACCATGAACCTCAGTGAGCAGTGCAAGATTGGGGAATCAGTGTACAAGGCAAACATAGAGGGTAAGGTTTTGGCAGTAAAAAGATTCAAGGAAGATGTCACAGAGGAGCTGAAAATTCTGCAGAAGGTGAATCATGGAAATCTGGTGAAATTAATGGGTGTCTCATCAGACAGTGATGGAAATTGTTTTGTGGTTTACGAATATGCTGAAAATGGGTCTCTTGATGGGTGGCTATTCTGCAAGTCTTGTTCAGATACATCAAACTCAAGGGCCTCCCTTGCATGGTCTCAGAGGATAAGCATAGCAGCGGATGTTGCAATGGGTCTGCAGTACATGCACGAACATGCTTATCCTAGAATAGTCCACAGGGATATCACAAGCAGTAATATCCTTCTTGACTCAAACTTTAAGGCCAAGATAGCAAATTTCTCCATGGCCAGAACTTTTACCAACCCCATGATGCCAAAAATAGATGTCTTTGCATTTGGGGTGGTTCTCATAGAGTTGCTTACTGGCAGGAAAGCCATGACAACCAAAGAAAATGGTGAGGTGGCTATGCTATGGAAGGATATTTGGAAGATCTTTGATCAAGAAGATAATAGAGAGGATAGGCTCAAAAAATGGATGGATCCTAACTTAGAGGGCTATTATCCTATAGATTATGCTCTCAACTTGGCCTCCTTGGCAGTGAATTGTACTGCGGATAAGTCTTTGTCCAGACCAACCATAGCAGAAATTGTCCTTAGCCTCTCCCTTCTCACTCAGCCATCTCCTGCGACATTAGAGAGATCCTTGACTTCTTCTGGATTAGATGTAGAAGCTATTCAAATTGTCACTTCCATAGCAGCTCGTTGA 1794 0.4169 MAVFFPFVLFRSQILCLALMLLFTNIAAQSQQTSGANFSCPSDSPPSCEAYVTYKAQSPKFLSLTSISNIFDTSPLSIARASNLDHEEDKLIPGQVLLIPVTCGCTGNRFFANISYEINQGDYFDFVATTSYENLTNWRVVVDLNPSLSPNTLPIGIQVVFPLFCKCPSKNQLDEGIKYLITYVWQPRDNVSLVSDMFGALPEDILSENNYGQNFTAASYLPVFIPVTRLPILVQSPSNGRKGGIRLRVIIGISLGCTLLVVVLILLVYLYSLKMKSLNRNASSAEIADKLLSGVSGYVSKPTMYETDAIMEGTMNLSEQCKIGESVYKANIEGKVLAVKRFKEDVTEELKILQKVNHGNLVKLMGVSSDSDGNCFVVYEYAENGSLDGWLFCKSCSDTSNSRASLAWSQRISIAADVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMPKIDVFAFGVVLIELLTGRKAMTTKENGEVAMLWKDIWKIFDQEDNREDRLKKWMDPNLEGYYPIDYALNLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPSPATLERSLTSSGLDVEAIQIVTSIAAR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02596 597 Gene3D Phosphorylase Kinase; domain 1 315 383 - -
Pste1g02596 597 ProSiteProfiles Protein kinase domain profile. 285 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02596 597 Pfam LysM domain 63 100 IPR018392 -
Pste1g02596 597 Gene3D Transferase(Phosphotransferase) domain 1 384 465 - -
Pste1g02596 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Pste1g02596 597 Pfam Protein tyrosine and serine/threonine kinase 341 463 IPR001245 GO:0004672|GO:0006468
Pste1g02596 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 570 - -
Pste1g02596 597 Gene3D Transferase(Phosphotransferase) domain 1 466 577 - -
Pste1g02596 597 SUPERFAMILY Protein kinase-like (PK-like) 319 563 IPR011009 -
Pste1g02596 597 FunFam Os07g0541700 protein 383 472 - -
Pste1g02596 597 ProSiteProfiles LysM domain profile. 52 99 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02596 Pste-Chr1 9887374 9889167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02596 38 570 Receptor kinase-like Gene Family AT2G33580 31.169 3.11e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste1g02596 PK_Tyr_Ser-Thr 5.1e-23 CL0016