Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02583 GCAAGTGATTCTCAATTAATCCACTTCTTATATCTCTCAATCTATCTCTTTTATTTGTTAATTATTTTCTAATCATTATTAATTTGAAGCTGCTTTTGTATAATTGCTACTTTAATTTTGAATGAAATGAATTATATATAAGCAGATCCAGATGCAGAAGTGGTGGCTCTGTCACCTAAGTCCCTCATGGCCACCAACCGTTTCGTATGTGAAATCTGCAACAAGGGTTTTCAGAGAGACCAGAATTTGCAGCTGCATAGACGTGGACACAACCTCCCTTGGAAGCTGAAGCAGAGAACAAACAAAGATCAAGTAAAGAAGAAGGTGTACGTGTGCCCTGAGAAGAACTGTGTGCACCATGACCCCTCTAGAGCCTTGGGAGATTTGACAGGGATAAAGAAGCACTATAGCCGAAAGCATGGGGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATACGCTGTGCAATCCGATTGGAAGGCCCATACCAAGATTTGTGGGACTAGAGAGTACAAATGTGACCGTGGCACACTTTTCTCCAGGAAGGACAGCTTCATAACCCATAGAGCCTTTTCTGACGCTTTGGCGGAAGAAAGTGCGAGGACAACAACAATTCCAGCAGCTTTGAGCAACTTGAGAAACAATCATCATTTGACCAATGCTCAAGGTTCGAGGATCCCTCAGATATTCTCGGGGTTTCACTCAGATCAATTCGATGGCTCAGGGACGACATCAGAACCATTGGCGAACTATGGTGACGAAAACCATCACCATCAGGAACAAAAGCTAAGGCTACCACTATGGCTAGACCACGCCAATAACAATCCTCTTCACAACTTTGCAACCAAACCAAGTGCTTTCACAAACTCCGTGCCTGATCTAGTGCAAACAGTGGACATGTTTGGGCCACAGTTTGTGAATTACCGTTACCCAGAAGCATCATTTGGAATTGGAATTGGAGGTGCCAACCTGTGTGCGCTACCGCCACATGGACTGAAGGAAGAACAAGAAGAAAACAAAGGAGAGTTGTCGCATAGCGGAGCCTCTAATTTGTACTTGAGCAGTAATCAGAACCCACCTCATTACATGTCAGCCTCCACACTGTTGCACAAAGTGGTTCAAATGGGATCTATGGGCAGCACCAACAACAACAATGCTGTTGTTGAGGTTCAGAAGCTGAACGAGTTGGTGAATGTGGAAGGGTGCACCAACCTTGGAGGTGGGTACTTATTAAATGACTCAAACAACTCGTTTGTGGTTGTGAATGGCACAAAGGGCTTGGAGCACATGGTGATGCCGGTGGATGAAGAGACACAAGCATCAATTATGGGGAAGCAATCACACTCAATAATCTCAAATAACAAAAAACATCTTGGTTTAACTAGAGATTTCTTGGGTGTTGGAGATAATAATAATAGTATTGGTTCTATAAGAAGACCCTTCTTTCAGCAAGAGCTTGTTGAATTTAATGCAATGGGGTCAGCCCCGGCCATGAACCTGCAGAGCCAGTACGGTGGACACTTCTGCTAGTTTCAGCTTTCAAACTTCCAATTTAATGAAATGTAGCTTAGAGCTAAAGAAACTAGTGAAGTTGTGTCATTGTGATATATATAGCTAGCTAGCAAGCTAGCAACTATACGTTATTAGTAGGAGCATATAAACTGAAGAATATAATATACCGAGTTGGAACGATCGAAGGGATTGAGTGGACTCAGTCATGCACAGTGAAACGTGGAGATTTCACGTGTGATATGCACAGAGGGGTCTCGTGAGGGGGGGTGGGGGCCAATGCATGTGAGAAGGGACAAAAGTAATAGATATGAGATGAGATGAGTCCAAAACTCAAAGGGTGATTTGATTCTCCGTTATGGAAGGTCCCTTCATGGCCATGCATGTCCATGGATGAAGCAGTAATGTTATCTTCTTCTTTTTTTTTTTTTTTTTTTACCAAGCTAGACTTTTCTCTGACGTGTAAGGTTGATAAAATTTTACATTGTCGTACCATTTACCAGATGGCTGTGACCTTGTTTTTCCGTCTTTTTCAGTGACCTTTTAACTGTGCAGGGCTTGAAATGCTTTCCACCGTGAAATAAAACACTACTATTTATACAGGTAATTAAACG 2126 0.4257 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKDQVKKKVYVCPEKNCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHTKICGTREYKCDRGTLFSRKDSFITHRAFSDALAEESARTTTIPAALSNLRNNHHLTNAQGSRIPQIFSGFHSDQFDGSGTTSEPLANYGDENHHHQEQKLRLPLWLDHANNNPLHNFATKPSAFTNSVPDLVQTVDMFGPQFVNYRYPEASFGIGIGGANLCALPPHGLKEEQEENKGELSHSGASNLYLSSNQNPPHYMSASTLLHKVVQMGSMGSTNNNNAVVEVQKLNELVNVEGCTNLGGGYLLNDSNNSFVVVNGTKGLEHMVMPVDEETQASIMGKQSHSIISNNKKHLGLTRDFLGVGDNNNSIGSIRRPFFQQELVEFNAMGSAPAMNLQSQYGGHFC 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02583 448 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Pste1g02583 448 FunFam Zinc finger protein MAGPIE 2 29 - -
Pste1g02583 448 Gene3D Classic Zinc Finger 2 29 - -
Pste1g02583 448 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 418 IPR031140 -
Pste1g02583 448 SMART c2h2final6 83 103 IPR013087 -
Pste1g02583 448 SMART c2h2final6 6 28 IPR013087 -
Pste1g02583 448 SMART c2h2final6 48 78 IPR013087 -
Pste1g02583 448 MobiDBLite consensus disorder prediction 272 295 - -
Pste1g02583 448 Gene3D Classic Zinc Finger 40 131 - -
Pste1g02583 448 FunFam protein indeterminate-domain 5, chloroplastic-like 61 140 - -
Pste1g02583 448 SUPERFAMILY beta-beta-alpha zinc fingers 5 103 IPR036236 -
Pste1g02583 448 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02583 Pste-Chr1 9761272 9763655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02583 1 153 IDZ Gene Family AT3G45260 84.314 2.58e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste1g02583 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03235 3 25039428 25042142 Pste1g02583 1 9761272 9763655 PCT