Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02581 ATGGAGCCGCAAACCACTCCGCCGCCACCGCCAGCCGACTCGCTCGATTCCTCCCCGCGCTCCTCCTGGGACGAGCCCTATCCTCCCTCCGCCGCCGCCGCCAAGCTCCGTCTGATGTGCAGCTACGGCGGTCAAATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACCCGCATCGTGGTCGTCCCCCGCCACACCTCCCTCTCCGACCTCTCCACGCGCCTCTCCAAGTCCTTCCTCCACGCGCGTCCTTTCCTGCTCAAGTACCAGCTCCCCAGCGAGGACCTTGACTCTCTTGTTTCTGTCACCACCGACGAAGACTTCGAAAACATGATCGACGAGTACGATCACCGCAACGCTGAACAAAACAATAACAATAATAACAAACCTTCGCGAATCCGTCTCTTCCTCTTCCCGACCCAGTCCGAGTCCTCCGCCAAGTCCGAGGAGTGGCTCAGCGGTTCCCTCGACGGGGCCCTCTCGGAGTCCGCCTCCGTCAACTGCCTCCTCGGACTCGACGACGATGCGCTCCTATCAAACACCAACGGTAACGGTAACGGAACCGTTAAACATTCCAAGGAGGTGTCGGATTCGCCTGTGCTCGAGACCAATTCGTCTTTCGGCTCCGGTTCTTCCGCCGCCAATTTGCCTCCGGTGAAGGTTCGCGTAGAGGATCAGAAGGGGCTGGGTGTTGAGGAGCAGTTTGCTCAGATGGGTGTGGGACAGAAGCAAGAAGAGACCTTTGTTGCCGCCGCGCCGGAATTCGATCATGGGGTCCCTGTGGGGTATAGAAAACCACCAACTCCACCACTTCAGCCTCAGCCTCAGCTTCAGCCTCTGCCTCTGCCTCAGCCTCCCCAATTTCAACCCAAACCATCTGGTCTTGTTGATTTGCCTTCGCCTGATTCACTTTCTTGTGATAGTAGTCTTTCAAATCCAATTTCACGCCCAAAACCAGCAATCTATCAAGACCAAGTTCAAATTCAATCTGGAAATCCTCAGCTTCCTAGTAATACCTCAATTGATGCCAAGCTTAATGTGACTGATTCACATGGTCAGATTCAGATGCAGCAGCATGTACAGGAACCTGGATATCTTTTACAACCACAATTTGATCAACAGCCACAGCCTCAGCATCATCAGACACAACAGTCTCAGCTGCATCAGCCTCAGCAATATATCCACAGCACACATTTAATTCACCATACCCCTGCAGGGCCTGTGTCAATACCTGCTGCATACTATCCTGTGTATCAACAACCACTCCATCCCCAGCAGCAGCAATTTGATCAACAATACCCAGTTTACTATGTGCAGACAAGACAGGCTCAACCATACAATCTGTCTGTTCAGCCTGCTAATGGAGCTGAATCTGTGACAACTTTTCCTTCTAATCAGTCCCAAAATCAGTCAACTTCTGCTGCTTACAACCCCATGACCAATCCTAAATCAGAAATAATACCAGGTGCATACAGAGCAGCGCCTGCCACCCCACAATTAGTTCGAGTTCCTCATAGTCAGCATCAGCAGCAATATGTTGCCTACTCTCAAATTCATCAACATCATCCACAAGCTGCGCCTCCTAATTCTGCGGTACCTGCTAATTATGCTTACAACTATGCCGATCCTGCACATGCCCAAATATTTTATACTCAACCTTTGGCACCGTCTATGCCTTCACAGTACCAGACCCTGCCGGAAGTTTCTGCTCAGGTTTCCCCAGACAGCATGAAGCAGCAGGTGAGAACCTCGCAGCCAATGTGAAAAGGAAAAGAAAAGATACAATTTTGAAGAAATGTGTTTGGTTTGCCTATAATTTTCTTCTGTAGCTTCTATCTTCTTGATCGTACCAGTTTGTGGCTTCTATCTCAGATAGATAATAAAGAAACTGTGGAAGTCTTTATACACTCTTTTTATGTCAATTTATAGCAAAGTGGTCCAGGGGTCAGTTATACTGTAAAAATTTAAGTCTCATCAACATTTTATTGTGAATTTCAAACATTTGTTGCTGAGATGGTTGTCATGTATATTATGGCTGGCATTTTTGTAGCTCTGGCGTGTGATTCTTGTTTCTTTTAGAAAAAGATCATAGTAAAAAACTTTTCATATTGA 2127 0.4908 MEPQTTPPPPPADSLDSSPRSSWDEPYPPSAAAAKLRLMCSYGGQIVPRPHDKSLCYVGGDTRIVVVPRHTSLSDLSTRLSKSFLHARPFLLKYQLPSEDLDSLVSVTTDEDFENMIDEYDHRNAEQNNNNNNKPSRIRLFLFPTQSESSAKSEEWLSGSLDGALSESASVNCLLGLDDDALLSNTNGNGNGTVKHSKEVSDSPVLETNSSFGSGSSAANLPPVKVRVEDQKGLGVEEQFAQMGVGQKQEETFVAAAPEFDHGVPVGYRKPPTPPLQPQPQLQPLPLPQPPQFQPKPSGLVDLPSPDSLSCDSSLSNPISRPKPAIYQDQVQIQSGNPQLPSNTSIDAKLNVTDSHGQIQMQQHVQEPGYLLQPQFDQQPQPQHHQTQQSQLHQPQQYIHSTHLIHHTPAGPVSIPAAYYPVYQQPLHPQQQQFDQQYPVYYVQTRQAQPYNLSVQPANGAESVTTFPSNQSQNQSTSAAYNPMTNPKSEIIPGAYRAAPATPQLVRVPHSQHQQQYVAYSQIHQHHPQAAPPNSAVPANYAYNYADPAHAQIFYTQPLAPSMPSQYQTLPEVSAQVSPDSMKQQVRTSQPM 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02581 592 MobiDBLite consensus disorder prediction 1 15 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 188 218 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 188 220 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 375 396 - -
Pste1g02581 592 SUPERFAMILY CAD & PB1 domains 51 151 - -
Pste1g02581 592 CDD PB1_UP2 39 143 - -
Pste1g02581 592 Gene3D - 55 144 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 571 592 - -
Pste1g02581 592 Pfam PB1 domain 51 144 IPR000270 GO:0005515
Pste1g02581 592 MobiDBLite consensus disorder prediction 307 322 - -
Pste1g02581 592 PANTHER OS05G0427100 PROTEIN-RELATED 12 419 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 268 297 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 462 483 - -
Pste1g02581 592 MobiDBLite consensus disorder prediction 1 28 - -
Pste1g02581 592 SMART PB1_new 50 145 IPR000270 GO:0005515
Pste1g02581 592 MobiDBLite consensus disorder prediction 262 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02581 Pste-Chr1 9750656 9753289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02581 31 178 MAP Kinase Kinase Kinase AT1G79570 34.395 6.22e-24 105