Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02575 GAATAAGGCCACATTGGACAACAAGACTAGTACTGCACAGCATTGGTTTTCATTTGGATCTTGGATTAATAGTTGCAATTCTATGTCCCAAGATTTTCAGCAAGGAATCTTCAGCTTCTCGAATGGGTTGGAGAGAGGAAGGGTAGTGAGTCCGCAGCAGCAGATCCGGAGGGACAAAGTAAGATTGCAAGGAGGGTTCGAGGCGGCGCAATTAGTAGGGATAGAGGAAGAGGAACCCGTGTACGAGACCGCCGGAATGTTGTCGGAGATGTTCAACTTTCCCCCTGCGGCTGAATTGCTGGAGCAGCAGCCGGTGACGGGGACGTTTCGTGCGACGAGACAAGCCGGAGAGTGGTACGGGAACAGACAACAACAAGGGGTGAATATGATGATAGGTGGGTTGGGGGATTCCAAGAACCAAAACGGGGTTAATAATAATCCGCACCAGAACCAGATTTCGAGCATTAATGCTGACTCGGCAGCTGCCATGCAACTTTTTCTGATGAACCCTCAGAGGAGGTCGCCTTCCCCTCCTCAAAGCACACCTTCCTCTACGCTTCACATGTTGCTTCCCAATCCTTCTTCCAATTCCATCCAAGGATTCACTGGTTCTGCTGCGGGAGGGTCTTTTGGTCAATTCGCTTGGGTTTCCGAACAAGGAGGCGTGGTGGAAGGGCAAGGTCTTTCCTTATCTTTGTCTTCTTCACTGGAAGCAGCCAAAGCCGAGGAATTGAGGATGGGGGAGAGTGGGTTTTTATTTTACAATCATCAACAAGGTGGCGGCGGCGGCGGCGGTGGTCCTTCTTCTTCCTCCGCACTTCACTTTCCATACAAGAATAACAATCATCATCAGGCATTGCATTTGCAAGGGGCGATAGGACACGACAACAACCACCAGGGACATGTTGGCTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTTTACGAAATTCCAAGTATGTGAAGGCTGCACAAGAGTTGCTCGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGACCAAGTTCAATAGGCAGAATTCAAACCCTAATTCAAATCCCGGTGGTGCTTCTTCGCCTTCATCAAAAGATGCTCCTCCTTTGTCATCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGACGAGGCATGTATTGTGGACAGAAGATACAACCACTACTGCGAGCAAATGCAAATGGTAGTGAACTCATTTGACCTGATGATGGGTTTTGGGGCGGCAGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACTCAATAACAGCGCAGCTGAAACAAAGTTGTGAGCTATTAGGGGAGAAAGATGGGGCAGGGACATCAGGTTTGACAAAGGGTGAGACCCCAAGGCTTAAGATGTTAGAACAAAGTCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGCGGGGCTTGCCTGAACGATCTGTCAACATTTTAAGAGCCTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCAAGACAGACTGGGCTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTAAAAGAAGTGGAGAGTGCAGAAGAGAGAGAAAAGAACCAAAGCAACAATAGCAATATTAGTGGCAACCAAGCACAAACTCCAAGCACACCAGCAGCGGCTACCACATCAACAGCAACAACAGCGCCACCACCATCAACAACAACGACAACAACAAAACCGACAGGCATCAATGCCCCCGAAAGCGACCCTTCACTTGTCGCAATGAATAATAGACAAGGCTTCTCGGAAAACCAAGAAATATCCACCACCACCTCCACCACTATAATGGCCTCCGTCAACGCCACCGCCTCTGAGGTGGCGCCACCCGTGTCTCAATGCTTCGACTCAGACCTGCCCCCTCACAGATTAATGGCCACTGATGACACGTGTCGCTTGGTCACTGCAGATTTTGGGACCGCACCTGCAACTGCTGACATTGGATCCACTCTCATTAGATTTGGGACCACACCCAGTGACGTGTCACTCACCCTAGGGCTTCGCCATGCCGGGAACATGCCCGAGAAAACTCCTTTCTCTGTTAGAGACTTTGGAGCCATT 2239 0.4953 MSQDFQQGIFSFSNGLERGRVVSPQQQIRRDKVRLQGGFEAAQLVGIEEEEPVYETAGMLSEMFNFPPAAELLEQQPVTGTFRATRQAGEWYGNRQQQGVNMMIGGLGDSKNQNGVNNNPHQNQISSINADSAAAMQLFLMNPQRRSPSPPQSTPSSTLHMLLPNPSSNSIQGFTGSAAGGSFGQFAWVSEQGGVVEGQGLSLSLSSSLEAAKAEELRMGESGFLFYNHQQGGGGGGGGPSSSSALHFPYKNNNHHQALHLQGAIGHDNNHQGHVGFGSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKTKFNRQNSNPNSNPGGASSPSSKDAPPLSSADRIEHQRRKVKLLSMLDEACIVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDSITAQLKQSCELLGEKDGAGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEVESAEEREKNQSNNSNISGNQAQTPSTPAAATTSTATTAPPPSTTTTTTKPTGINAPESDPSLVAMNNRQGFSENQEISTTTSTTIMASVNATASEVAPPVSQCFDSDLPPHRLMATDDTCRLVTADFGTAPATADIGSTLIRFGTTPSDVSLTLGLRHAGNMPEKTPFSVRDFGAI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02575 719 FunFam BEL1-like homeodomain protein 4 473 535 - -
Pste1g02575 719 Coils Coil 533 556 - -
Pste1g02575 719 SUPERFAMILY Homeodomain-like 472 537 IPR009057 -
Pste1g02575 719 SMART HOX_1 470 534 IPR001356 GO:0003677
Pste1g02575 719 MobiDBLite consensus disorder prediction 143 163 - -
Pste1g02575 719 CDD homeodomain 470 531 IPR001356 GO:0003677
Pste1g02575 719 Gene3D - 473 535 - -
Pste1g02575 719 MobiDBLite consensus disorder prediction 315 340 - -
Pste1g02575 719 Pfam Homeobox KN domain 487 526 IPR008422 GO:0003677|GO:0006355
Pste1g02575 719 SMART prehox3 282 418 IPR006563 -
Pste1g02575 719 MobiDBLite consensus disorder prediction 315 347 - -
Pste1g02575 719 Pfam Associated with HOX 287 417 IPR006563 -
Pste1g02575 719 ProSiteProfiles 'Homeobox' domain profile. 467 530 IPR001356 GO:0003677
Pste1g02575 719 MobiDBLite consensus disorder prediction 543 607 - -
Pste1g02575 719 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 168 555 - -
Pste1g02575 719 MobiDBLite consensus disorder prediction 552 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02575 Pste-Chr1 9707849 9714758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02575 282 717 Homeobox Transcription Factor Family AT2G23760 54.016 3.25e-149 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste1g02575 POX 5.5e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02575 1 9707849 9714758 Pste1g02575 1 9707849 9714758 ECH
Pste7g01392 7 12636255 12643423 Pste1g02575 1 9707849 9714758 ECH
Pste1g02575 1 9707849 9714758 Pste7g01392 7 12636255 12643423 PCT