Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02569 ATGAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCTATTGATCTTTCAAGACTGAGTAGCTACAGTGATCTGCTGAGTGAACTAGAGAGACTGTTTGGCATGGAAGGCCTTCTAAAAGATCCTGATAAGGGATGGAGGATCCTCTACACTGACAGTGAGAATGACATAATGGTTGTGGGAGATGACCCATGGCATGAATTTTGTGATGTGGTGTCCAAGATCCATATCTACACCCAAGAAGAAGTAGAAAAGATGACAATTGGTATGACCAGTGATGATACTCATAGCTGTTTGGAAGAGGCACCAGTGATTATGGAGGCTTCGAAGTCTTCCTCAGTGGGTCAGCCAGATTATTCTCCGACGGCAGTTAGAGTCTAAGTTTCAGGGTCGTCTTAAAATATTTTATATGTTGGTCTGTCTCTGTACAAGATTAATCTACACGTTTTTATGCTGTGTTTGGTTACGGCCCTTTGATAGGCCCAGCAAAATTGGACGGTCAGCGCTAGAAAGACTGACAATTAAGTGCACTAAAGTAGCTAAATAAGGGCTAGTCTTGGCATCATAAAATCAGCAATTATGGCTTGAGTTACGTACTCTGGAATAATGGTGATGGTGATGGTTTCCAAATCTTCCACCATGTTTGCGTAATATTACTATTGTTGGGAACCTCTTTGAGGTGCGATGCGGGCTTGAATATATGAATTCGTGGCCGTAGAGGAACAAGAAAAACATAATTTGGTAAAAAGTTGAGAAATGC 760 0.4171 MKVHKQGSLVGRAIDLSRLSSYSDLLSELERLFGMEGLLKDPDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIGMTSDDTHSCLEEAPVIMEASKSSSVGQPDYSPTAVRV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02569 126 SUPERFAMILY CAD & PB1 domains 2 77 - -
Pste1g02569 126 FunFam Auxin response factor 1 87 - -
Pste1g02569 126 ProSiteProfiles PB1 domain profile. 1 82 IPR000270 GO:0005515
Pste1g02569 126 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 87 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste1g02569 126 Pfam AUX/IAA family 45 83 IPR033389 -
Pste1g02569 126 Gene3D - 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02569 Pste-Chr1 9656436 9657402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02569 2 126 B3 DNA Binding Superfamily AT5G60450 74.400 4.53e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste1g02569 AUX_IAA 1.6e-05 CL0072