Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02562 AAGATGGACGCAGGTAGGGCGTGGTAGACGTGAGCACACAGAAACGAAACCCGGACGTGTTGCAATAGAAAAACCGGATTGGATAATGGGCGATAGGTCCGAATTTTTGGTTCTGGTTTTGAGTCTCCTGGGTCAAAAGAGACACGCAAAGCAAATCAGCCACCCCTAACAAAACAGAAACCGTGTGTGTATGCGAGGTCGTGTGAACCTCCCCTCTCTTCCAAACCCTAATCGCCTCCTCCAATCCTTTGCTTCTATGGTCAGTCATTCCTATTCCACTTTCCTTTCATCGATCAATCTCTCTCTTTCGATTTCAATTCCCTCGCTTCCGTAATTCTCTTCATTTAATTTTATTAGACCGAGCACTGCTTGGGCCGGCATGTGCTAGCTTCCTCCTCCATTTTCTGGTTGCTGTTTCTCGTTATTCATTCTGTTTCGGCCAAATTATTGGTTTTCACGCCATGGATTTAGTACCCAGCGTCAAGGAAAAATTGAACTATTTTCGTATAAAGGAGCTCAAAGATGTGCTCACTCAGTTACACCTTTCAAAGCAGGGAAAGAAGCAGGATCTTGTTGATCGAATATTATCTGTTCTCTCAGATGAACAAGTTTCGAAAATGTGGGCTAAAAAGAATGCCGGTGGGAAAGAACAGGTGGCAAAATTAGTGGATGATACATATAGGAAAATGCAGATATCTGGGGCCACTGATCTAGCATCTAAGGGACAGGGTGCTTCAGATAGCAGCAGTGTAAAGGTTAAAGGTGAATTTGATGATTCCTCTCAACCAGCTGCAAAAATTCGCTGTCTATGTGGAAGTAGATTGGAAACAGAGGATTTGGTCAAGTGTGATGATCCAAGATGCCAGGTGTGGCAACACATAAGTTGCGTTATTATTCCAGAGAAACCTACAGAAGGCATCCCAGCAGTTCCTGATAAATTTTATTGTGAACTCTGTCGTCTAATCCGTGCAGATCCATTTTGGGTTCCAGTGGCGCACCCTTTGCCTCCTGTGAAGTTGACCACAACCAGTAATCCAACTACTGATGGAGCCAACCCGGTGCAGAGTGTGGAGAGAACATTTCAACTTACCAGAGCAGACAAGGACTTGGTATCGAAACAAGAATTTGATGTTGAGGCTTGGTGTATGCTCCTGAATGACAAGGTTCCATTCAGGATGCAATGGCCGCAGTATACAGACCTGCAGGTCAATGGTGTTCCTGTTCGTGCAACTAACAGACCTGGTTCACAGTTGCTTGGGGCTAATGGTCGGGATGATGGTCCAATTATCACGCCATACACAAAAGACGGAATTAATAAGATTTCCTTAACAGGATGTGATGCTCGCATATTTTGTTTAGGGGTTCGTATTGTTAGAAGGCGCAGCATGCAGCAGATCCTAAACTTAATTCCAAAGGAGTCTGATGGTGAGGGATTTGAAGAAGCCCTTGCCCGTGTCTGCCGCTGTGTTGGGGGTGGAAATGCAACTGATGATGCTGATAGTGACAGTGATTTGGAAGTTGTTTCAGATACTTTCAGTATCAACCTTCGTTGTCCAATGAGTGGTTCGAGAATGAAGGTTGCTGGAAGATTCAAACCATGTATTCACATGGGTTGCTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGATCAAGGAAGTGGCAATGTCCTATATGTCTCAAAAACTATGCTTTGGAGAATATCATAATTGACCCTTACTTCAATCGCATCACTTCTATGATGGTGAACTGTGGTGAAGAAATTACAGAGGTTGAGGTGAAGCCTGATGGTTCTTGGCGTGTTAAGGCGAAGAGTGAAAGTGAACGCCTGGAATTAGGAAATCTAGTACAGTGGCACCTTCCTGATGGATCCCCATGTGTTTCAACTGATGGAGATGTCAAGAGAGTTGATACATTGAAGCAGGTCAAACAGGAAGGTGTTTCAGACAGTCCTACTGGTCTAAAACTCGGCATCAGGAAGAACCGCAATGGAGTTTGGGAAGTCAGTAAACCTGAGGGGACAAACACCTCTTCTGGTAATAGATTGAAAGGGGTTTTTGGAAATGCTGAACAGGTTGTTATTCCAATGAGCAGCAGTGCTACTGGAAGTGGCCGGGATGGTGATGATCCTAGTGTAAATCAGGGTGGTGGCGGGCATATTGACTATTCCACTACAAATGGGATTGAGATGGATTCTCTGTGTCTCAATAATGTTGATTTAGCATATGAATATACTGCACACAACACTTCTGCTCAGGTGGGTGGTACAGAAGTTATTGTTCTTAGTGATTCTGAAGAAGACAATGATCTTTTGGTATCTCCTGCAATTGCTTATAATAAGAACAATAGACATGATGCTACAGATGGTTACTCTGTACAACCACCTGTTATTGTTGACCCATATACTGAAGATCATAATCTTGGAGGAAATTCTTGCTTGGGACTTTTTCCTAATGATGATGATTTTGGGATGTCTTCCCTGTGGTCATTGCCTTCTGGAAGTCAGGCTGGTCCCGGATTCCAATTATTTAGTTCTGATACAGATGTATCTGATGCATTGGTTCATCTGCATCATGGTCCTATGAATTGCTCCTCGTCACTAAATGGTTATGCATTGGCTCCTGAAACAGCTTTGGGATCTGCTAGTATCTTGCAAGATTCCTCAGCTGGACGGTCAGATGCTGATCTGAATGGTGGTTTGGTGGACAATCCATTGGCATTTGGTGGAGATGATCCCTCGCTTCAGATTTTTCTCCCCACAAGACCAGCTGATTCATCCATGCAGAATGAATTGAGAGATCAGGCCAATGTGGCAAATGGTGTCTGTACTGAGGAGGATTGGATATCCCTTAGTCTTGGAGGTGGTGCTGCTGGTGGCGGCAATGGTGATGCTTCCACTCAAAATGGGTTGAATTCTAGACATCAAATTCCAACCAAAGAAGGTGCCACAAATACTTTGGATGATCCTGGTTTGTTGCTCACTGACCTTACTGAATAG 2999 0.4395 MDLVPSVKEKLNYFRIKELKDVLTQLHLSKQGKKQDLVDRILSVLSDEQVSKMWAKKNAGGKEQVAKLVDDTYRKMQISGATDLASKGQGASDSSSVKVKGEFDDSSQPAAKIRCLCGSRLETEDLVKCDDPRCQVWQHISCVIIPEKPTEGIPAVPDKFYCELCRLIRADPFWVPVAHPLPPVKLTTTSNPTTDGANPVQSVERTFQLTRADKDLVSKQEFDVEAWCMLLNDKVPFRMQWPQYTDLQVNGVPVRATNRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVRRRSMQQILNLIPKESDGEGFEEALARVCRCVGGGNATDDADSDSDLEVVSDTFSINLRCPMSGSRMKVAGRFKPCIHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMVNCGEEITEVEVKPDGSWRVKAKSESERLELGNLVQWHLPDGSPCVSTDGDVKRVDTLKQVKQEGVSDSPTGLKLGIRKNRNGVWEVSKPEGTNTSSGNRLKGVFGNAEQVVIPMSSSATGSGRDGDDPSVNQGGGGHIDYSTTNGIEMDSLCLNNVDLAYEYTAHNTSAQVGGTEVIVLSDSEEDNDLLVSPAIAYNKNNRHDATDGYSVQPPVIVDPYTEDHNLGGNSCLGLFPNDDDFGMSSLWSLPSGSQAGPGFQLFSSDTDVSDALVHLHHGPMNCSSSLNGYALAPETALGSASILQDSSAGRSDADLNGGLVDNPLAFGGDDPSLQIFLPTRPADSSMQNELRDQANVANGVCTEEDWISLSLGGGAAGGGNGDASTQNGLNSRHQIPTKEGATNTLDDPGLLLTDLTE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02562 845 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Pste1g02562 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Pste1g02562 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 448 IPR013083 -
Pste1g02562 845 Pfam PHD-finger 114 166 IPR019787 -
Pste1g02562 845 SMART PHD_3 114 166 IPR001965 -
Pste1g02562 845 Pfam SAP domain 12 42 IPR003034 -
Pste1g02562 845 CDD SP-RING_Siz-like 361 410 IPR031141 -
Pste1g02562 845 FunFam E3 SUMO-protein ligase SIZ1 1 66 - -
Pste1g02562 845 CDD PHD_Bye1p_SIZ1_like 114 165 - -
Pste1g02562 845 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Pste1g02562 845 Gene3D SAP domain 3 58 IPR036361 -
Pste1g02562 845 ProSitePatterns Zinc finger PHD-type signature. 115 165 IPR019786 -
Pste1g02562 845 SUPERFAMILY SAP domain 1 59 IPR036361 -
Pste1g02562 845 MobiDBLite consensus disorder prediction 808 829 - -
Pste1g02562 845 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Pste1g02562 845 SMART sap_9 11 45 IPR003034 -
Pste1g02562 845 MobiDBLite consensus disorder prediction 801 845 - -
Pste1g02562 845 SUPERFAMILY FYVE/PHD zinc finger 109 169 IPR011011 -
Pste1g02562 845 MobiDBLite consensus disorder prediction 544 567 - -
Pste1g02562 845 MobiDBLite consensus disorder prediction 84 103 - -
Pste1g02562 845 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02562 Pste-Chr1 9609214 9617731 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste1g02562 PHD 3.1e-07 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03250 3 25160730 25173256 Pste1g02562 1 9609214 9617731 PCT