Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02561 ATGTTCCCAATGCTTGCTTTTTGCAAGCTCAACCTTTTTCCCATCCTTCAAAACTTTCTTCTTCATCTCATGTTAAGCTTTCTATAACCTCATTATCTGTCACCGCTTAACCTTTCCGTTTCCCTCGCTGTGTACTCTGTCATACCAAGAAAGAAACTAAGGTAACCTAAGTGTCAGTACTCATTTTTTCTTACACTTGTTCTTTGCTCTAACGGTCTTCTACGTTGGAGATGATGTTCCCTATGGTTGTGTTGCTTTTTCTTGCGTGCAATTTTCATGTTGCACCTGTGAGCTCTTTGACCGTTGAAGGCTCTGTGCTTTTGACGCTGAAGAAGTCCATCATCACAGACCCAGAAGGGTCCATGAGTAACTGGAACTCTTCTGATGACACCCCATGTTCATGGAATGGGATCACATGCAAGGACCAGAGGGTTGTCTCCATTAGCATCCCAAAGAAGAAGCTTTATGGGGTTCTTCCCTCAGAGTTAGGGTCTCTTTCCCACCTCCGACATCTGAATTTGAGGAATAACGACCTCTCTGGAGACTTGCCTGCAGGGCTCTTTGGAGCTCAGGGACTGCAAAGTTTGGTTCTTTATGGCAATTCCTTATCTGGGTCTGTTCCAGATGAGATTGGGAAGCTCAGGTATCTTCAGACTCTAGATTTGTCACAGAATTTCCTCAACGGGTCTTTACCTGCTGTAATAGTCCAATGCAAGAGGCTCAGAACACTGGTTCTTAGTCATAACAATTTCACTGGTCCTCTGCCTGATGGGTTTGGTGTTGGGTTGTCTTCTCTGGAGAAACTAGACCTTTCTTTCAATGAATTCAATGGTTCAATTCCCAGTGACATGGGAAAGCTGTCAAGCCTGCAAGGCACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCAGCTGGTCTTGGGAATTTGCCTGAGAAGGTTTACATTGATCTCACTTACAACAATTTAAGTGGTCCAATACCCCAAACTGGTGCTTTGATGAATAGAGGACCAACTGCTTTTATTGGCAATTCTGGTCTCTGTGGTCCCCCTTTGAAGAATCTGTGTGCCCCAGATACTCATGGAGCCAGTTCACCTTCCTCTTTTCCATTTTTGCCGGATAATTACCCACCTCAGGATGGTGATGATGGAATTGGGAAAAGTGGGAAAAGTAAAAGGCTAAGTAAGGGTGCTTTGGTTGCCATTGTTGTAGGGGATATAGTAGGAATTTGCCTTTTGGGTTTTTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGTTTTACTCAGGATCAGGAGGAAAAAGGTTTTGACAAGGGAAGGAGATTGAGGAAGGAGTGCTTATGCTTCAGAAAGGATGAATCTGAGACCCTATCTGACCATGTTGAGCAATATGATCTTGTCCCATTAGATGCTCAAGTGGCCTTCGATTTGGATGAGCTTCTTAAGGCTTCGGCTTTTGTTCTGGGAAAAAGTGGAATAGGAATTGTCTACAAGGTTGTTCTTGAAGAAGGGCTGGCCTTGGCTGTGAGAAGGTTAGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACAGAAGTCGAAGCAATAGGAAAGTTAAAGCATCCAAATATTGTTACTCTAAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATGTTCCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAAACTGGACTTGCCACATTTACACCGCTGTCTTGGTCTGACAGAGTGAAAATCATGAAAGGAATTGCAAAAGGATTGATCTACCTGCATGAATTTAGTCCAAAAAAATATGTCCACGGAGACCTCAAGCCAGGGAACATTCTGTTAGGACATAGCATGGAACCTTGCATTTCAGATTTTGGCCTCGGACGCCTTGCTAACATTGCTGGAGGGTCTCCAACCTGGCAATCCAACCGGGTGGCTGTGGAGAAATCACATGAAAGACAGAGGAGCTTATCCACAGAAGTTGCAACTAGTATTTTGGGAAATGGTTATCTAGCTCCAGAAACACTGAAAGCAGTGAAGCCATCACAGAAGTGGGATGTTTACTCATATGGTGTGATTCTGTTAGAATTGATTACAGGAAGATTGCCTATTGTCCAATTGGGAAACTCAGAAATGAACCTTGTTCAATGGATTCAGCTCTGTATTGATGAGAAGAAGCCACTCTCTGATGTATTGGATCTTTATTTAGCTGAAGATGCAGATAAGGAAGAGGAGGTAATTGCCGTTTTGAAGATTGCCATTGCTTGTGTCCATAGCAGCCCAGAAAAAAGACCCATAATGAGGCATGTGCTTGATGCTTTAGATAGATTATCCATACCCTCTGATTAAGAAGTTTCAGGAAGCTTTGAATTGTGAATTCTGTTCGTTTGTGAGGCTTTTTACACTTTGTTATAAGATTGAGAAGGGTTTCAAGCTGCTAGGATTGTTTATAAGTGTTTCACTAAATCTATGAATTCTTCTTGTATTCAAGAAAATGAGGTAATATGTTTTGACACAAAGCGATCCCTTTCACTCAACATTTTTATGCTCCTGTACATAGGAACTGATTTGTGTTGGTGTGGATATTCTACGTAGCATCCTTGAGCGACTATTCATGTTATTATATTGTCATGCTTTTAAAATTTGTTGGGCCAATGAGAACC 2680 0.422 MMFPMVVLLFLACNFHVAPVSSLTVEGSVLLTLKKSIITDPEGSMSNWNSSDDTPCSWNGITCKDQRVVSISIPKKKLYGVLPSELGSLSHLRHLNLRNNDLSGDLPAGLFGAQGLQSLVLYGNSLSGSVPDEIGKLRYLQTLDLSQNFLNGSLPAVIVQCKRLRTLVLSHNNFTGPLPDGFGVGLSSLEKLDLSFNEFNGSIPSDMGKLSSLQGTVDLSHNHFSGSIPAGLGNLPEKVYIDLTYNNLSGPIPQTGALMNRGPTAFIGNSGLCGPPLKNLCAPDTHGASSPSSFPFLPDNYPPQDGDDGIGKSGKSKRLSKGALVAIVVGDIVGICLLGFLFSYCYSRVCGFTQDQEEKGFDKGRRLRKECLCFRKDESETLSDHVEQYDLVPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLEEGLALAVRRLGEGGSQRFKEFQTEVEAIGKLKHPNIVTLRAYYWSVDEKLLIYDYVPNGSLATAIHGKTGLATFTPLSWSDRVKIMKGIAKGLIYLHEFSPKKYVHGDLKPGNILLGHSMEPCISDFGLGRLANIAGGSPTWQSNRVAVEKSHERQRSLSTEVATSILGNGYLAPETLKAVKPSQKWDVYSYGVILLELITGRLPIVQLGNSEMNLVQWIQLCIDEKKPLSDVLDLYLAEDADKEEEVIAVLKIAIACVHSSPEKRPIMRHVLDALDRLSIPSD 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02561 711 MobiDBLite consensus disorder prediction 291 316 - -
Pste1g02561 711 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Pste1g02561 711 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Pste1g02561 711 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 184 - -
Pste1g02561 711 SUPERFAMILY L domain-like 30 278 - -
Pste1g02561 711 Pfam Protein kinase domain 413 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02561 711 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Pste1g02561 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Pste1g02561 711 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Pste1g02561 711 Gene3D Ribonuclease Inhibitor 20 78 IPR032675 -
Pste1g02561 711 Gene3D Ribonuclease Inhibitor 79 284 IPR032675 -
Pste1g02561 711 Gene3D Transferase(Phosphotransferase) domain 1 483 709 - -
Pste1g02561 711 SMART serkin_6 412 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02561 711 PANTHER OS05G0588300 PROTEIN 134 705 - -
Pste1g02561 711 Pfam Leucine Rich Repeat 91 108 IPR001611 GO:0005515
Pste1g02561 711 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Pste1g02561 711 SUPERFAMILY Protein kinase-like (PK-like) 412 703 IPR011009 -
Pste1g02561 711 SMART LRR_typ_2 89 113 IPR003591 -
Pste1g02561 711 SMART LRR_typ_2 137 161 IPR003591 -
Pste1g02561 711 SMART LRR_typ_2 186 210 IPR003591 -
Pste1g02561 711 ProSiteProfiles Protein kinase domain profile. 407 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02561 711 CDD STKc_IRAK 413 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02561 Pste-Chr1 9603517 9606500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02561 1 711 Receptor kinase-like Gene Family AT2G01210 67.222 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste1g02561 Pkinase 6.1e-34 CL0016