Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02541 ATGAAGCCAAGTTTCTTAGAGTAACCTTCATTTTGCAAGTTGCAACCAACGCTTTTGCTACTGCCTTTTATTGTTTTCGGTTGGACAAGAACCTTAAGCAGACAAAGGACATCTCTTTTCCTTTTCAACAAATTTATTATTCCGTTTTACACTATTCTTCGATCTTCTACTCCTAGGCTCATTAATTTCAGTTTTCAACCTTTGCAGAATCTTCAAGATGGCCACCCAACGACACCAGTTGCAACCTTTAATTCTCATTTAAGCTATCGTCTGAAAGATGTTATTACCAGTACTATGTTTTCTTCTAAGGCCGAGAATTCAAGTTGAATATTTGTTTTTAGTTTCAGCTAAGGAAGAGTGATGAAGTGATGATATTGATTACCCATTTGAAGCGAGTTGAATTAGCATCGAAAAATGTTTGTTCTTCATCACCATACAAATCTGGCTATAGTTTTCACAATCTTCATAGTATGCACAACAAGAGCACAAAACCTGACCAGCTGCAATGGCAAATGCGGGGGGAGGACTCTTCAGTTCCCTTTTGGGTTCTCGCAAGGTTGTCCAATACAGCTTAATTGTACCAAAAACCAAGTACAACTTGGGGAATTTCCCGTGGAAAACGTGACAAACAGCAACATATTCGTGAATCTCCCTGCAAAATGCAACCGTAGCATGGAATCCATTAAAAATCTTTTCACTGATAATTTGGCTCCCACGAATAACAACAGCTTTCTGGTGCAAGATTGTAAAGAGGTGTTAGGCGGGTGCGTTATTCCGGCTTCTAATTTTGTGGGGAACCAGATTGATGTGGAGAGCTGCAATAACAAAAGTGCTAATATAAGTTGCTTTTCGAAGCAGCAAAAACAAGAGGAAGTGGGTGTGATAACATACAATGATTTGAATAGAACTAAGTGTAAATTCTTGTTCTCTGCGTTTTATTTTGGGCAGAGCAGGGAATTTGGGCTGCAGTTTCAGGTGGTTGAGTTGGGATGGTGGCTTCAGGGGTCGTGTGATGAATGTTCTGACAACACTACCTGCACACAGCTCCGTCTCCAAGAAGGGAAACATGGGTTACGGTGCCAGTGCATTGATGCTTTCACCGGAGACGGTTTCAGAAACGGCACTGGTTGCCGGAAAGCTTCAGCTTCGAGTTGCAGAGTTTCAACACTGACGTCCGGGGGATGTGGGAAAGCAACCAAAATCGGTGTTGTTGTTGGAGTGATTATAATCGGAGCTTTGGTGGTGGCCGGTCTGTTTCTTCTGTGCTACTGTGCCAGGCGTCGTTCTACTTGTTTATCAAAACATACCAAAGTAAAGCGCCTAGTACGTGAAGCTGCTGGCAACTCTAGTGTACCTTTCTATCCCTACAAAGAAATCGAAAAGGCCACAAATTCATTCTCTGAGAAGCAGAGGCTGGGAACCGGGGCATTTGGGACAGTTTATGCTGGAAAAGTGCACAATGATGAGTGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACAACAACAGTGCTGACCAAGTCATGAATGAGATCAAGCTACTTTCTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGTTGCTGCATAGAAAAGGGAGAGCAGATTCTTGTCTATGAGTATATGCAAAATGGAACACTTTCTCAGCACTTGCAAAGAGAGAGGAGTAAAGGACTACCATGGACCATAAGACTTACCGTTGCTACTGAAACTGCTAATGCTATAGCATATCTCCACTCTGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTACAAATTCAAATCTAAATTGGCTGATTTTGGGCTTTCTAGGCTTGGGATGGTCGAAACATCTCATATCTCAACTGCCCCACAAGGGACTCCAGGTTATGTCGATCCGCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTAATCGACCTCGGAGTGAGGTTAATTTAGCTGCACTAGCAGTTGATAGGATTAGGAGAGGTGCTGTAGATGAGATCATAGACCCCTTCCTTGAACCATATAGAGATGCTTGGACACTGTATTCTATTAATAAGGTGGCTGAACTTGCATTTAGATGCCTGGCTTTCCATAGTGACATGAGGCCTTCTATGATGGAAGTAGCAGAGGAGCTAGAACACATTAGACGCAGTGGATGGGCAAGTATGGAGGAAACTCTTACGGCTTCACCAATTGGGTCCGCTAGTTCATCGCCTGGCTATGGAAGCGAGAAGTCACTGAGTGGTATCAGAAAAGCTGGTCAAGGGAGTGAGAGATTGATTGTTCCACAGAAGACTGAGAGTTTTTTGCAATTTATGGAGGTGAAGGACAGCTCCCCTGTATCAGTGCATGATCCTATTCCTTGGTCAAGTGGACAGAGCTCACCATCGTCAAACAGCTTGTTGGGAAATGTCATCCCCTGACAATATACTTACTTGGAGGGAATAGCCTCCAGCAATGTGAATACTAAAGGCATATATAGCACTTTCCTTTCCTCTTTCGCAGTTGATGCTATAGCTATTTTTGTGTATGATTGTTTTAGGATTCTACTTTACTAACAACTTCCAAAGATACATGCATAAAATATTATATAATCAGTAATCAATATACAGAATTCAC 2698 0.4192 MFVLHHHTNLAIVFTIFIVCTTRAQNLTSCNGKCGGRTLQFPFGFSQGCPIQLNCTKNQVQLGEFPVENVTNSNIFVNLPAKCNRSMESIKNLFTDNLAPTNNNSFLVQDCKEVLGGCVIPASNFVGNQIDVESCNNKSANISCFSKQQKQEEVGVITYNDLNRTKCKFLFSAFYFGQSREFGLQFQVVELGWWLQGSCDECSDNTTCTQLRLQEGKHGLRCQCIDAFTGDGFRNGTGCRKASASSCRVSTLTSGGCGKATKIGVVVGVIIIGALVVAGLFLLCYCARRRSTCLSKHTKVKRLVREAAGNSSVPFYPYKEIEKATNSFSEKQRLGTGAFGTVYAGKVHNDEWVAIKKLRQRDNNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSKGLPWTIRLTVATETANAIAYLHSAIHPPIYHRDIKSSNILLDYKFKSKLADFGLSRLGMVETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFNRPRSEVNLAALAVDRIRRGAVDEIIDPFLEPYRDAWTLYSINKVAELAFRCLAFHSDMRPSMMEVAEELEHIRRSGWASMEETLTASPIGSASSSPGYGSEKSLSGIRKAGQGSERLIVPQKTESFLQFMEVKDSSPVSVHDPIPWSSGQSSPSSNSLLGNVIP 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02541 695 ProSiteProfiles Protein kinase domain profile. 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02541 695 MobiDBLite consensus disorder prediction 672 695 - -
Pste1g02541 695 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Pste1g02541 695 Pfam Protein tyrosine and serine/threonine kinase 331 600 IPR001245 GO:0004672|GO:0006468
Pste1g02541 695 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 676 IPR044652 GO:0004672
Pste1g02541 695 Gene3D Transferase(Phosphotransferase) domain 1 404 618 - -
Pste1g02541 695 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Pste1g02541 695 FunFam Wall-associated receptor kinase-like 20 404 613 - -
Pste1g02541 695 MobiDBLite consensus disorder prediction 666 695 - -
Pste1g02541 695 SMART serkin_6 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02541 695 FunFam Wall-associated receptor kinase-like 14 295 403 - -
Pste1g02541 695 MobiDBLite consensus disorder prediction 618 637 - -
Pste1g02541 695 MobiDBLite consensus disorder prediction 618 632 - -
Pste1g02541 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pste1g02541 695 SUPERFAMILY Protein kinase-like (PK-like) 308 601 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02541 Pste-Chr1 9505589 9511650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02541 1 693 Receptor kinase-like Gene Family AT2G23450 56.294 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste1g02541 PK_Tyr_Ser-Thr 6.4e-46 CL0016