Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02531 ATGGACAGCAGTGACACATACACCCCCACTTCCTCTGCCCCACTTTCTCAGTCTCCCACTTCCTCTTCTTCCTCACCCCCACCACATCCTCCTCCCACTGTTGTCATGAGCCCTTGTGCTGCATGCAAGATTTTGAGGAGAAGATGTGCTGAGAAATGTGTCTTAGCACCTTATTTCCCTCCCACTGAACCAGCCAAGTTTACCATTGCTCACCGTGTATTTGGTGCCAGCAACATCATCAAGTTCCTACAGGAACTTCCAGAGTCTCAGAGAGCTGATGCAGTGACCAGCATGGTTTATGAGGCCAGTGCAAGAATAAGAGACCCTGTTTACGGTTGTGCAGGAGCAATTTGCCAGCTCCAAAAGCAGGTCAATGAACTTCAAGCACAATTGGCCAAGGCACAAGCTGAGCTTGTGAACATGCAACTTCAGCAAGCCAATCTTGTGGCTCTAATTTGCATGGAGATGGCACAGAGTCCACAGGAATTCCCACAGCAATCAGTGGATAATTTCATTTCAACTCCTCCACACAGTGGTGGCTATCAAAGTGGCATGACCTTCTTTGAGGAGAACACTGGCCTGAACTCACTATGGGAACCCCTTTGGACTTGA 612 0.4886 MDSSDTYTPTSSAPLSQSPTSSSSSPPPHPPPTVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMEMAQSPQEFPQQSVDNFISTPPHSGGYQSGMTFFEENTGLNSLWEPLWT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02531 203 MobiDBLite consensus disorder prediction 1 20 - -
Pste1g02531 203 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Pste1g02531 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 157 - -
Pste1g02531 203 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Pste1g02531 203 Coils Coil 117 144 - -
Pste1g02531 203 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02531 Pste-Chr1 9422400 9423882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02531 34 203 AS2 family AT1G07900 66.474 3.67e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste1g02531 LOB 1.8e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02531 1 9422400 9423882 Pste1g02531 1 9422400 9423882 ECH
Pste3g03258 3 25210299 25211907 Pste1g02531 1 9422400 9423882 PCT