Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02518 AGGAATCATGATTAAAGGGGGGTTTAGATTTTGGAATAGTATTCAGCTGCACGCCAGAACTGGAGGAATTAAATTTTTTTTAATTTATTTTATTTCCGTTCATTCTGTGTTTTTTTGTAATTGTCCATATGTTGGATTGCTGGTTACATTGAGAGAGCTGGTGTTGCCATTTGCTGGGTCGTCTCATGCAAAAGGCATTGTTCTTGAAAAAATAGGGATTGAGGCTAAGCAACCAAATTCTGCCATCAGAAAATGTGCTCGAGTACAATTGATAAAAAATGGAAAGAAGATTGCAGCTTTTGTGCCAAATGATGCTTGCTTGAACTATATATTTAAGGAAATGAAAGATGAAGTGCTTATTGCTGGTTTTGGCCGAAAAGGGCACGCAGTTGGAGATATTCCTGGGTCCGATTTAAGGCTGTTAAGTATCTCTTCTAGCCCTCTTCAAAGAGAAGAAGAAGCC 463 0.3823 MIKGGFRFWNSIQLHARTGGIKFFLIYFISVHSVFFCNCPYVGLLVTLRELVLPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDACLNYIFKEMKDEVLIAGFGRKGHAVGDIPGSDLRLLSISSSPLQREEEA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02518 152 ProSitePatterns Ribosomal protein S12 signature. 74 81 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pste1g02518 152 Pfam Ribosomal protein S12/S23 52 142 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pste1g02518 152 SUPERFAMILY Nucleic acid-binding proteins 52 135 IPR012340 -
Pste1g02518 152 Gene3D - 48 149 IPR012340 -
Pste1g02518 152 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 51 143 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pste1g02518 152 FunFam 40S ribosomal protein S23 44 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02518 Pste-Chr1 9357471 9358850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02518 50 146 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 80.412 1.86e-49 154