Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02504 ATTCCGTGGGGATAAAATGCAATGGCAGTTGCAAAAGGGAAGGGAAACTGAAGCAGAGTCAGAGTGGTATAGTATAACAAACAAAACAAATAAACGCGCACCAAACAAAGGCATACCAAGGAGATCCATTCCCGGGAAAATGGTTGGGTTCATAGAAAACTTGCCGCCAATGGATCTGATGCGTTCGGAGAAGATGACCTTCGTCCAGCTCATTATCCCCGCCGAGTCCGCGCACCGCGCCATCACCTATTTGGGTGAACTCGGCCTCTTTCAATTCCGCGACTTAAATGCTGAAAAAAGCTCCTTTCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTTAAGGATCAAATCAATAAAGCTGGTCTGATGTCTTCCTATTCAGTCATGGAATCAGATATTTATCTGGAGGATTTAGAGATACACCTTGCTGAGCATGAACATGAACTAATTGAAACAAACTCTAATAGTGAAAAACTTCGGCAATCATATAATGAACTCCTCGAGTTCAAGATTGTGTTACAAAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGTGGTTTTGCTCCAGAAGAGAGAGAACTGCAGGAGAATGTTTTCTCAAATGGAGACTATGTTGAGACACCATTTTTATTTGAACAGGAAACGAGGCCTGCACCGTCAAATCAATCTGGTTTAAGATTTATCAGTGGCATAATTTCTAAATCCAAAGTTCTTAGGTTTGAAAGAATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATCATGGATCCTATTTCAACTGAGATGGTTGAAAAAATTGTCTTTGTTGTGTTTTTCTCTGGGGAGCAAGCACGAACAAAGATTCTGAAAATTTGTGATGCATTTGGTGCAAATTGTTACCCTGTTCCCGAAGATATAAGTAAACAGAGGCAAATAACTTCGGAGGTTTCATCCCGTCTTGCTGACTTAGAGGCAACTCTGGATGCTGGGGTTAGGCATCGGAATAAGGCTCTAGCTTTTGTAGGAGGCCATTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTCTATTTGCCAAAACACAGATTCAAGAGGCACTGCAGCGTGCAACTTTTGACAGCAGCTCTCAAGTTGGCATAATCTTCCATTCAATGGATGCACTGGAATCACCACCTACGTATTTTAGGACCAATAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGAGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAACTATTATATTCCCATTTTTGTTTGCCGTTATGTTTGGTGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCGTTGGTTCTTATAGCACGTCAAAGCAAGCTCAGCACTCAGCGACTTGGCAGCTTCATGGAGATGCTATTTGGTGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTATCACATATTTGGTGAATCTGCTTACAAATGCCGAGATGGTTCATGCAGGTGTCTTTTATTTCTCTCTCTCTTCTCTGGATGCACATACTATTGGCTTAGTAAAATACAGAGAACCATATCCATTGGTGTGGATCCCAGCTGGCGGGGAAGTCGTTCAGAATTGGCTTTTTTAAACTCTTTGAAGATGAAGATGTCTATTCTATTTGGCGTGGTTCACATGAACTTGGGAATTATATTAAGTTATTTCAATGCTTGTTTCTTTGGCAACACGCTGGATATAAGGTATCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGTTATCTTTCCCTTCTCATCATTATCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCTTTTGACAATCTTGGCGAGAATCAATTGTTCTGGGGCCAAAGGCCACTTCAGGTTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTGTACTTAATACCTCTGAGGTTGATCTTGAGTTGGAACCAGATTCTTCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGATCTTTGTGCACCAAATGATCCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACAGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTACGACAATCTTGTCATTCGGTTAATCGGGCTAGCTGTTTTTGCCTTTGCGACGGCCTTTATCCTACTAATGATGGAGACTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTAGAATTTCAAAACAAATTCTACAGCGGTGATGGATACAAGTTCAAACCTTTTTCCTTTGCCTCCTTAACAGAGGATGAAAATTGATCCATTCTTCTGTCTTTGTCTGCTGGCAAATATGTGGAAAGGATATATACAAAAAGTAGAATGAACACAGAAAGAGAATTGTTGGGATCCAAACTAGAGAGGTTATTGGCACTGGGTTTGCTTGATATTTGATCTAGCAACACATTTCTGGCTCATTTTCCCGTGGCTATGCTGGTGCGAATGGAAGGCATCTGTAATAGAATATTTACTTTCTAATTTTCCTTTTTCTTTCTTAGAGTAGGAGAAACAGGAAGAGATTAGAGAAGTGAGTGGTTAGGCTAATTTTGTTTTGTAAAAAAGAAGTCCATCATAGTTTAGCTATTGATTATTTGGGGTTACACACATAATGTAGTGCGGGCTTTCCTAGGATGTACTCATGTAGGTGTTTACTCTCAATTTTTTTGTAATGATTAATCAAAAGTTATAGTCCCATCTTTTTGTAAGGTTTAATCAGAAAAATTGATACCATCTCTGTGGATTTGAGTCATGATACTGCACACTAGTAATAAAATTTGAAATAGTTTGTGGC 3152 0.3991 MQWQLQKGRETEAESEWYSITNKTNKRAPNKGIPRRSIPGKMVGFIENLPPMDLMRSEKMTFVQLIIPAESAHRAITYLGELGLFQFRDLNAEKSSFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSYSVMESDIYLEDLEIHLAEHEHELIETNSNSEKLRQSYNELLEFKIVLQKACGFLVSSHGGFAPEERELQENVFSNGDYVETPFLFEQETRPAPSNQSGLRFISGIISKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKIVFVVFFSGEQARTKILKICDAFGANCYPVPEDISKQRQITSEVSSRLADLEATLDAGVRHRNKALAFVGGHLTKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQIQEALQRATFDSSSQVGIIFHSMDALESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGESAYKCRDGSCRCLLFLSLFSGCTYYWLSKIQRTISIGVDPSWRGSRSELAFLNSLKMKMSILFGVVHMNLGIILSYFNACFFGNTLDIRYQFVPQMIFLNCLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLALIAVPWMLFPKPFILKKLHNERFQGRTYGVLNTSEVDLELEPDSSRQHHEEFNFSEIFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLIGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYSGDGYKFKPFSFASLTEDEN 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02504 868 PIRSF ATP6V0A1 50 868 IPR026028 GO:0000220|GO:0046961
Pste1g02504 868 Pfam V-type ATPase 116kDa subunit family 78 860 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pste1g02504 868 MobiDBLite consensus disorder prediction 14 35 - -
Pste1g02504 868 Coils Coil 140 167 - -
Pste1g02504 868 PANTHER VACUOLAR PROTON ATPASES 54 866 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02504 Pste-Chr1 9296805 9308215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02504 42 861 Primary Pumps ATPases(2) AT2G28520 78.034 0.0 1288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03268 3 25270006 25284367 Pste1g02504 1 9296805 9308215 PCT