Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02489 GAGCTAACAAGCCTTTCGAGGAAAGCAGAGAGAAGAAGTGACATCCATGGTGTCAAGGTGCACCAACTTGGCAGTGAAGCACAAATAACAGTTATAGCAACATTGTGGTCCATATGGCGGTGGGGAATTAAGATTGTTGAGAGGGAGCATCGAGTTTCGCAAAGAGGGTTGTGGCCTATCAGAGAGTTTGCTTCTACAATATGCCGACCAATCAGAGAGGAATCGAATATACCAAGGGCAATCATGAGTGAAAAAGGAGAAAGAACATGTCCTCTCTGCGCTGAAGAAATGGATTTGACAGATCAACAATTGAAGCCTTGCAAATGTGGCTATGAGATCTGTGTCTGGTGCTGGCACCACATAATGAACATGGCTGAGAAGGATTATATCAAGGGGAGATGTCCTGCATGTCGTTCTCCTTATGATAAGGAAAAAATTGTTGGGATGGCTGCTAACTGTGAGAGATTGTTGAATGAAATTAATATGGAGAAAAAGATGAAGACTCAAAAAGTAAAGTTTAAATCATCAGATGGGCGTAAGAAGCTCAGCAGTGTGCGAGTGATTCAGAGGAATCTTGTTTACATAGTTGGGTTGCCTCTCAATCTTGCAGATGAAGATCTTCTTAAGCGGAGAGAGTATTTTAGTCAGTATGGGAAGGTCGTAAAAGTCGCAATGTCTCGAACAGCAGCCGGTGTCATTCAACAGTTTCCAAATGATACTTGCAGTGTGTATGTATATTCTCTTAAAGCTTCCTTGACGGAAGAGGAAGCAATCCATTGTATTCAAAATGTACACGGATTTGTTCTTGAGGGTAGACCTTTAAGACTTACATGGGATGTCTTGCTCATCGATTCTTCGTTTTTGGATTTAACATTTCAGGGCTTGTTTTGGAACCACAAAATATTGTCATGCATGGCTCCGAAATGTGATCTCTATGACCAGCCTTGCAGCAATCCAGATTGTCTATATTTGCATGAGATTGGTCCCCAAGAAGATAGTTTTACTAAAGATGAAATAATTTCGGCATACACTAGAAGTCGAGTTCAACAAATCACTGGTGCCACAAACAATATGCAATGGCGGTCAGGGAATGTATTACCTTCTCCACAGGATGACAGTAAGAATAATTCTTCTGCAAAGCCTATTGCGAAGAACACTTCAAGTAATTCTCTCAGCACTGGAAGAGATTCACCTCCAAATGAAATCCATGGGAGGTATATTGGCCTTCCTGCTAGTGCTGCATGGTATGTAGCAACGAATTATCAACCCCCTGCTGGAGGTCTATCATATCCAAATGGACTGTCCATGCCCAAACCTGATATAGGCAGCAGTGCTGAAGCTGTTACAGGTTCAATTCAGGCTTCTGATGATACAACGAGGCTTCCATCTAGTGATGGGAGTCATAGTATGACACCTAAAGTGAAAAGTGAATTGTTGAAACCTGTTAAACAATACGACAATTGTGTGGACACTCTAGTTAATGCAGGGGAAAAAACTTTTTCTTGTTCTGGTTCTGAGGAAGCAGTGACTGCTACCAATGAAGAGATTCAGAATTTGTCCAACGAGTTATCCTCAATTAGCATTGATAGAAATGCTGAACATTGTGGTATATCCAAACCTAATAGCCCACCTACTGATTTTTTCTTGACTAAATCTCCACAAATTCAAGGATCGCAATATAATGTCGACAGATTTAGAGAAGAAATAATAACTACAAATGTGGCTAGTAAAGCTATGTCAGATAATGTGGCTTGTAATTCTAAGGAACAGTGTGATTGGAAATTGGATTCTCAATCTCTAGTAGTAGCAGATACAGTAGAAATTGATGGTGTAACATCTTTTGATAATCAAAGGCTCAAGGTTCCAGAAGTTATTTGTCATTCTTATTTGCCAAAGACAACCAGCTTCTGTCATGCATCAAACCATTCTAGCCATTGTCTTGTGCCACATGGTGAAGCTTGTACTGGCATAAATGCAGGTTCTGTATCAGCTGATGATAGAGTTCGGGATGAATCTATATTACATGCATCTAATATATTATGTAATAGTCATCCTGAGAAATTGATAAGCAACTGCTCCTATGGTCTGCTTCATAAAGAAAGAAATGGGCATAGAATTCAAAGTTTAGTTGGTGAAGCAGTTAATGCTGGACTTGATGTTGCTGTGGATAACGGTGAAAGCAGTATAATATCAAATATATTGTCCATGGACTTCGATGCCTGGAATGACTCATTAATGTCACCTCGTAATTTAGCCAAGTTGTGTGCCAATACCAATAACCAGTCTGGTCCTTTAAACAAATCTAGTTCTTGGAAAGTTCACGCTAGCAGTCATTCAAGGTTCTCTTTTGCGAGTCAGGAAGAACCAGAAATCCAAATGTTTGATACACATGCATCTTACAGTGTCAGCCATCAACAGATAAACAATACATTGTTCCAGAATTTCGTCGATAGAGGCTTGTGTATGGATAAGTTGGGCATTTCAAATGAATTTCCTACCAGTAACTTTGAGGAAACTGGAACTATGGGCAGTAGTCATTCCATTGCATCCTCTAATAAGCTATCTGCCATTTCTAGAGCACAAATTTCAGCCCCACCAGGATTTTCCATTCCAAGCAGGTTGCCACCTCCTGGTTTTTCCTCCCATGTTAGAGTGGAGCAGGCCTTTGACTCCATTTCTGGGAATTCTTTGTTTGACCATTCCCTTTTGAGAAATTCATATCAGACACCACCAGCTAGAAACCTTGGTAGTGCAGGGGACATTGAATTTGTGGACCCTGCTATTTTGGCAGTTGGCAAAAGGAGACTTCAAGGTTCATTGAACAGCCCAGCTCTGGACATGCGATCTGTTTTCACGCCTCAATCAAATTACTTCGGAAATGATGCTAGACTACAATTATTGATGCAAAGATCTCTGTCACCTCAGCAAAACCTTAGATTTACTGAAATTGGGAATACTTATTCTCAACTTGGTGATTCTTCTTATGCTGTTTCTTCTAGGTTTGATCAATCACTAGTCAGTAACGGAGATCCATTCCAACGGTTGTCTCGTCAGCAGTCTGCAAATGGAGTATTATCAAATGGGGTATGGGATAGGTGGAATGAGTTGCAGGATGGAAACAGTTTGGGTGTGGCTGAACTTTTGAGAAATGAAAGACTTGGATTCAATAAATTTTACTCAGAATATGATGATTCAAAATTTAGGATGCCAAATTCTGGGAATCTTTACAACAGAACATTTAGGATGTGACCTTTTGCTAGTTATGTTGTCGTTGTTGTTGGAAATGGTAAAACCCAGCAGAAATGGACAATTAATTTTTGTGCTGCCGAGGATGATGGAACTGATGCTTGCTGGCGGGTATTGGGCTACCTAATGAAGAAGCTCTCACTAACGGTTATTTATGGTTTCAGTTGGTAATTAGTAAACTACATCAGTTTTCATGATTTAATTGGTTTATATGACGTTGCCCATCTTGCATACACACGAAAATGTCTTCACCTACCTGTGTCAAAATGAGATTGTGTAAAAAATTATTTTTTCATTTTTGTACTGGATTTCATATTTTTTATGTCAAGAATGATAATGGCGCTTGCTTTTCTTTTTTGGAGCACTCATTTTCCCTCTTTTCTTTTGTAGTTCAGGATTTGCAGAAGTGAACTGTTTTGGGTTTTACGATATCAACTGTCAATGCTAACGTGATCAAACTGGCAATAGATCTTAGTCGAGTGTTTCCTTCATAGTCCAAGAGCATGGGGACTTGGTTCAAAATCAAGATAAGTTTCATCTATTGTTTGTAACTTACCTTTTAGTTTTAACTACCCTTGTTGGTAGAAGGTAGAGGTTTGATTCATCCGGTTAAAGGGAACTTAATCAAGTTATATTGGAGTGGATTTACATGCTATAAGTTCAATGCTCACATTGGGAATGATACCGTTCGCTCTGAGCTCGTGGTAATGATTTTTCTCCAATCTGACAATTATTTTAAGCCTTTTAGTTTTAACGATGAACAGACTGTCC 4017 0.3953 ELTSLSRKAERRSDIHGVKVHQLGSEAQITVIATLWSIWRWGIKIVEREHRVSQRGLWPIREFASTICRPIREESNIPRAIMSEKGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMNMAEKDYIKGRCPACRSPYDKEKIVGMAANCERLLNEINMEKKMKTQKVKFKSSDGRKKLSSVRVIQRNLVYIVGLPLNLADEDLLKRREYFSQYGKVVKVAMSRTAAGVIQQFPNDTCSVYVYSLKASLTEEEAIHCIQNVHGFVLEGRPLRLTWDVLLIDSSFLDLTFQGLFWNHKILSCMAPKCDLYDQPCSNPDCLYLHEIGPQEDSFTKDEIISAYTRSRVQQITGATNNMQWRSGNVLPSPQDDSKNNSSAKPIAKNTSSNSLSTGRDSPPNEIHGRYIGLPASAAWYVATNYQPPAGGLSYPNGLSMPKPDIGSSAEAVTGSIQASDDTTRLPSSDGSHSMTPKVKSELLKPVKQYDNCVDTLVNAGEKTFSCSGSEEAVTATNEEIQNLSNELSSISIDRNAEHCGISKPNSPPTDFFLTKSPQIQGSQYNVDRFREEIITTNVASKAMSDNVACNSKEQCDWKLDSQSLVVADTVEIDGVTSFDNQRLKVPEVICHSYLPKTTSFCHASNHSSHCLVPHGEACTGINAGSVSADDRVRDESILHASNILCNSHPEKLISNCSYGLLHKERNGHRIQSLVGEAVNAGLDVAVDNGESSIISNILSMDFDAWNDSLMSPRNLAKLCANTNNQSGPLNKSSSWKVHASSHSRFSFASQEEPEIQMFDTHASYSVSHQQINNTLFQNFVDRGLCMDKLGISNEFPTSNFEETGTMGSSHSIASSNKLSAISRAQISAPPGFSIPSRLPPPGFSSHVRVEQAFDSISGNSLFDHSLLRNSYQTPPARNLGSAGDIEFVDPAILAVGKRRLQGSLNSPALDMRSVFTPQSNYFGNDARLQLLMQRSLSPQQNLRFTEIGNTYSQLGDSSYAVSSRFDQSLVSNGDPFQRLSRQQSANGVLSNGVWDRWNELQDGNSLGVAELLRNERLGFNKFYSEYDDSKFRMPNSGNLYNRTFRM 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02489 1082 CDD RRM_CNOT4 186 275 IPR034261 -
Pste1g02489 1082 MobiDBLite consensus disorder prediction 441 473 - -
Pste1g02489 1082 Coils Coil 502 529 - -
Pste1g02489 1082 SUPERFAMILY RNA-binding domain, RBD 185 276 IPR035979 GO:0003676
Pste1g02489 1082 SMART rrm2_1 192 277 IPR003954 GO:0003676
Pste1g02489 1082 Gene3D - 192 277 IPR012677 -
Pste1g02489 1082 MobiDBLite consensus disorder prediction 446 471 - -
Pste1g02489 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 158 IPR013083 -
Pste1g02489 1082 ProSiteProfiles Zinc finger RING-type profile. 90 138 IPR001841 -
Pste1g02489 1082 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 82 1076 IPR039780 GO:0004842|GO:0030014
Pste1g02489 1082 CDD mRING-HC-C4C4_CNOT4 89 139 IPR039515 -
Pste1g02489 1082 FunFam RNA binding (RRM/RBD/RNP motifs) family protein 192 277 - -
Pste1g02489 1082 MobiDBLite consensus disorder prediction 358 397 - -
Pste1g02489 1082 Pfam RING/Ubox like zinc-binding domain 90 142 - -
Pste1g02489 1082 SUPERFAMILY RING/U-box 81 147 - -
Pste1g02489 1082 MobiDBLite consensus disorder prediction 358 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02489 Pste-Chr1 9182605 9197121 Proximal