Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02484 ATTCCTTCTGTCTCTTCGTTCCGTGAGTTCCTTCGTCTCTCTCCTCCTCTGTTTTCCGGTCGCCGGAAAATTTATTCGGCGTTAACGACACGGAAAACCTATCCTGAATCCGGTTACTTCTTCGCTTCGTTTTCCACTTCTCTTTCTCTTTCACTTACATTACCTCTTTCATTCGGTTGTTTCCGATCGGATCCATTTCTTCGCCGGAACACCGTAGCCGGCGAAGTTAGCGCGACGATGTTAGATCTTAATCTCAATCCGGAGTGGACCGATTCGACTCGTGACAGCGACTCGCCGTTACCGTTAGAGAAGTTTCCAGGAGGTTCGAGGGACCAAATGGCGGAGTCAGGGACTTCGAATTCCTCCGTCGTGAATGCGGACGGGCCGAGTAACGGCGGCGGCGACGAGGACTCGTGCTCTACCCGTGCTGATGATGTGTACACTTTCAATTTCGATATCCTTAAAGTCAAAGGCGTGAACGACGTCGTAACAAAGGAGCTGTTCCCGGTGAATGGAGGAGTGGCTACGTCGTCGTTTTCAGCGAGGAATGGTTTGGTGGATCTCTCGTTTGAACGCGAGGGAGGAAACAGTGAGGTGAAGATGCTTCAGCCTCGACCTCAGAGTCAGACTCAGCAGCCAGTGAAGAAGAGTAGAAGAGGGCCAAGGTCTCGAAGCTCGCAGTACAGAGGTGTTACCTTTTACAGAAGGACGGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACGGCTCACGCTGCTGCTAGGGCCTATGATCGAGCTGCTATCAAGTTCAGGGGAGTTGATGCTGATATCAATTTCAATCTGAGTGATTATGAGGATGATCTTAAACAGGAAACGCGGAAGCACTTGGTGGATATGGAACTAGATGGTGCATCCGATTTGTTTTTTCACCATTTTCTTACTGATGAGCAGATGAAGAATTTGTCCAAGGAGGAATTCGTACATATCCTGCGTCGCCAAAGTACTGGTTTCTCAAGAGGAAGTTCTAAATACCGAGGAGTAACGCTCCACAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTCGGCAAAAAAAACATGTCTCAGATTGTAAGATGCATGTTTTCAACCAAACGATTGGCAAAGGTATATATATCTTGGCTTATTCGACAGCGAAGTAGAAGCTGCAAGGTCCTAATGGCTTATGACAAAGCAGCTATCAAATGCAACGGAAGGGAAGCAGTAACCAACTTTGAGCCAAGTGGCAGTCAGAATCTTGATCTCAATCTGGTCATGGCGACCCCAGGACATCCTCCCAAAGAAAATTGGGGGCAACTTCAGTTCCACTCCATCGCATACAATTCACATAGTGGAAGAAATTCGATGATGGAAGCCAATGTTAATTCAGGAATTGGTAATCCATCTTTGAAAAGCCTGGTTGTAACTGAAGATCGTCCTTCTGTATGGAATGACATGTGTCCTAATTTCTTTCCCAATGAGGAAAGAGCAGAGATAAGCATTGATCCTTTAAAAGGACTCCCCAATTGGGCGTGGCAAATACATGGCCAGAACAATGCTACCTCAGTACCAACGTTCTCTGCTGCAGCATCATCAGGATTCTCAATTTCAGCTTCCTTTCCATCCACTGCCATCTTTCCAACAAGATCTATGACCTCAATTCCCCAGAGTCTTTGTTTTACCTCATCCACCACGCCCTCCAGCAATGCATCTCAAAATTATTACCAGGTTAAGCCCCCGCAGGCACCACTATAGCCCATCTTGTGCAGATTCAAGGCAAACCATTTAAAGTGTTTGCGTTCAAAATTCTTTGTATAATCCAGTAACTGATTGATGTATAATGAGACTTGACACTTGATTGCTACCTCTTGCTTAAACTATAAGGCCCCATGTTTGAACAAATTTTCCTTGAATCAAATGCTGCTATTTTTAGTGCAATAACACAGCGATGTTGCTGCTTTCCTCAAATTTGTTTAGAATCAAATTTCATGGTATGCTGATTGTGCATCCCATAAATGGGAGAAACCAAAAGAGTATTTATATTTTCCATTGTAG 2085 0.4542 IPSVSSFREFLRLSPPLFSGRRKIYSALTTRKTYPESGYFFASFSTSLSLSLTLPLSFGCFRSDPFLRRNTVAGEVSATMLDLNLNPEWTDSTRDSDSPLPLEKFPGGSRDQMAESGTSNSSVVNADGPSNGGGDEDSCSTRADDVYTFNFDILKVKGVNDVVTKELFPVNGGVATSSFSARNGLVDLSFEREGGNSEVKMLQPRPQSQTQQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQETRKHLVDMELDGASDLFFHHFLTDEQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKNMSQIVRCMFSTKRLAKVYISWLIRQRSRSCKVLMAYDKAAIKCNGREAVTNFEPSGSQNLDLNLVMATPGHPPKENWGQLQFHSIAYNSHSGRNSMMEANVNSGIGNPSLKSLVVTEDRPSVWNDMCPNFFPNEERAEISIDPLKGLPNWAWQIHGQNNATSVPTFSAAASSGFSISASFPSTAIFPTRSMTSIPQSLCFTSSTTPSSNASQNYYQVKPPQAPL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02484 594 SMART rav1_2 227 289 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 SMART rav1_2 346 429 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 CDD AP2 227 285 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 SUPERFAMILY DNA-binding domain 226 284 IPR016177 GO:0003677
Pste1g02484 594 MobiDBLite consensus disorder prediction 572 588 - -
Pste1g02484 594 MobiDBLite consensus disorder prediction 87 139 - -
Pste1g02484 594 FunFam AP2-like ethylene-responsive transcription factor 226 285 - -
Pste1g02484 594 ProSiteProfiles AP2/ERF domain profile. 227 283 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 MobiDBLite consensus disorder prediction 572 594 - -
Pste1g02484 594 Gene3D AP2/ERF domain 345 424 IPR036955 GO:0003700|GO:0006355
Pste1g02484 594 Gene3D AP2/ERF domain 226 284 IPR036955 GO:0003700|GO:0006355
Pste1g02484 594 PRINTS Ethylene responsive element binding protein signature 347 358 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 PRINTS Ethylene responsive element binding protein signature 405 425 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 MobiDBLite consensus disorder prediction 195 228 - -
Pste1g02484 594 ProSiteProfiles AP2/ERF domain profile. 346 423 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 192 444 - -
Pste1g02484 594 Pfam AP2 domain 227 275 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 MobiDBLite consensus disorder prediction 112 128 - -
Pste1g02484 594 CDD AP2 345 425 IPR001471 GO:0003700|GO:0006355
Pste1g02484 594 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02484 Pste-Chr1 9151036 9155132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02484 80 369 AP2-EREBP Transcription Factor Family AT2G28550 59.344 1.09e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste1g02484 AP2 9.1e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03274 3 25336314 25340731 Pste1g02484 1 9151036 9155132 PCT