Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02474 GCCTTATCACCTCAATTCAGGGCATGGTTTTGTGGCACCACACTCTCGCTCATCCTTCAACACCCACACACACTATGGACCTCAGCTTAGATTTGAGTTTGGGCTTTGTTCCCAAACCCCTTTCCCTCTTTTTCGGCGACGTTTCTGCCAACACCGACAAACTCGCCAGGCTCGACGGTGTCCTCCACAGATTGGAGGACGAATTGAGCAAAGTCGACAACTTCAAACGCGAGCTTCCTCTTTGCATGCTCCTCCTCAACGATGCTAAAGCCAGATTGAAGGACGAGAAAATAAAGTGTTCAGGAATGCAAGATCCACCACTCAAAATCAATTCTGGAGGAAATGAAAATGAAAGCTCTGAGAAGAAGACTTGGATGAGTTCAGCTCAGCTTTGGAGCTCACAAAGAACCAAATCGAGGAATGATGAAGTTGATAGGTCTGTGCCAGAGAACCCAATGAATGGAAATTCGTGTGTCCCGGAGAAGGAGGGTTCGCAAGTTCCGAGCTTTGGTTTGATGGCACGTGTGTCTGAACTGAATCACAGCAATTCCAAGAGTGTTTGTGGAGATACTAGTTCTGGGTCTTCTTTGCTGCGTGTTGAGGTACAGAGTCAACCACAGCCGCCCCAACATATGCAGCAGAATCCTAGGAAGCAACGGCGATGCTGGTCTCCGGAGCTTCATCGGCGTTTTGTGGATGCACTTCAACGACTTGGCGGAGCACAAGTGGCCACCCCTAAACAGATTAGAGAACTGATGCAGGTGGAGGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGACTTCATGTTAGGAGATTCCCAAATTCTTCAGTTGGTCAAGCTGATAATGGGTCTTGGATGACCCAAGATCAATGTGGGGATAAATCAAAGGGTTTGTCAGAGTCAGGTTCTCCACAAGGTCCTCTCACACCTCTCCTCCTACGAGGAGGGTCTGCTAAGGGTCTTTCTAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCAGGAATTGGAAAGGAGGACACCACCAGCAGCTTGAAGCTGATAATCAGAGCCTCTAAAATTTTGCTGATAAATGATAATAAAATACATAAATGATGAAGACCCAGAATTTGACAAAAGAATAATAGATCTAACAGATAGAGCTATAGGGATCAAGTTTATGCTACCATTGTTTTAAACTGTTTGGTAGAGAGCAACTGAGTTTTTGCAGATTTTTCAGGTTTCTTTTTTCTAAAAACTTGGTATAGTTGTATGCATCTTTAATTTTACTGGGCAATTTTCATACACTAATTTGTGGTATGGCTTTTGGATGTTGAATTTTATGCAAATGCCAGAGGTTTTATCTTGAACGTACAGGCACAAGTTTCTCTCTTAGCTTTTGCATCATTAACAATAAAGTGTTAAATCAGTGTCTGGCACGATCGTTTGAGAATATTGAGGACACATTTCCTCAATCTTAAGTAGACGTGCTTTTAAGCATTTTGGCTGTATTTTATTAAGGTTGACATAAAGTGTCAGGATTTTTCCAACAGCATATCAGTTGTCAATATTCAATGATGGCTTTTTCAT 1596 0.4317 MVLWHHTLAHPSTPTHTMDLSLDLSLGFVPKPLSLFFGDVSANTDKLARLDGVLHRLEDELSKVDNFKRELPLCMLLLNDAKARLKDEKIKCSGMQDPPLKINSGGNENESSEKKTWMSSAQLWSSQRTKSRNDEVDRSVPENPMNGNSCVPEKEGSQVPSFGLMARVSELNHSNSKSVCGDTSSGSSLLRVEVQSQPQPPQHMQQNPRKQRRCWSPELHRRFVDALQRLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRFPNSSVGQADNGSWMTQDQCGDKSKGLSESGSPQGPLTPLLLRGGSAKGLSSPGRNSVDAEDEQSDCRNWKGGHHQQLEADNQSL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02474 353 MobiDBLite consensus disorder prediction 194 213 - -
Pste1g02474 353 MobiDBLite consensus disorder prediction 327 343 - -
Pste1g02474 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Pste1g02474 353 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Pste1g02474 353 FunFam Myb family transcription factor 209 267 - -
Pste1g02474 353 Gene3D - 209 266 - -
Pste1g02474 353 MobiDBLite consensus disorder prediction 93 157 - -
Pste1g02474 353 MobiDBLite consensus disorder prediction 100 129 - -
Pste1g02474 353 MobiDBLite consensus disorder prediction 272 303 - -
Pste1g02474 353 MobiDBLite consensus disorder prediction 271 353 - -
Pste1g02474 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
Pste1g02474 353 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Pste1g02474 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 40 338 IPR044787 GO:0003700|GO:0006355
Pste1g02474 353 MobiDBLite consensus disorder prediction 194 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02474 Pste-Chr1 9056072 9058354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02474 18 260 G2-like Transcription Factor Family AT4G37180 44.275 1.64e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g02474 Myb_DNA-binding 2.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01251 7 11462355 11464545 Pste1g02474 1 9056072 9058354 PCT