Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02469 TCTCTACCAGTCAAGTGTTTTCCATAGAAAATTTCTTTTCGCAAAAGAAAAAGGATTAGGAGAGAAAAGCTTTGAGAAATGTTAGAACCTTGTTTCCTAAGTTGCTGATTTTCCTTCTTTGATTGGAAATTGTTTTTTGCTGTTGTAATTTTATTTTTGCTCTCTATTTTTCGAAACGAGAATGGAGCTCTGACTATTGTGGTTTTTGATTTTTTTTTCTGGATTGTTTTTTCCAAGTTGCTGCATCGAGCTTGCAAATGGAGGTCTGGTTGTTATCAGTGAAGCTCTGAAGGATATTGGTATGAATGGAAAGTTATACCTTGTGCTTAGACAGGAGCTTTGAGAGTTCTTTGGTGCAGGAACAGGTTGTCGTTCCATTTCATTAAATTTGCTATGATTTTTTTTTTTTTTTGAGCTTTTGGTTTCTGTATGGGGACTGCAGTTTGGAGGTATGGATCTATGTTTTTTTATCTTAACTTTTTTCAAATCACAACTATGTTTTTATTATTAAGTCTAGATTATTTTTATGAATAGTATGATAACGATTACTGTAAGCAACTACTGATTTTACTCCCCATGATATGTGTGTGTATATTTGGGCCTCTTGGGTGGAGTATCCTCAGGTATAGGGTGTCTTTTTTTTTTCATGTTTATGATAAAAGTGCTGACTTGACTGATGGATAGGGTTGTATTTGCAGAAATTGATAGTTGGAGCACTTGAGATGTGGAGAATCCATGACTCACTTGACGAGGGTATTGCGTTTGTATGTTAATTCCTCACAATGTTTTTTCAGTGTGGTTGATATAGGCTGGTCCGATGAACAATAATGTTGGGAAGGGGAAAAAAGGTTTGGCAGAACAAAATCATATGTTTTTTGACAAAAAGAGTCTCCATAATGGAGTAGTTAACGGAGGGAGAGGCTGTGGATCCTCAACTGAAGATGACACAAGGTTTAATAAGGTGATTGAGGATGGAAACAATGGGCTGAGGGGTCTGATTCAAATCCATGGGAGCTTGCAGATTTCACAGCAACCGCCTCAAGGGCCAGTCATATGCTGGGAGAGATTTCTCCCTGTGAGATCAATAAAAGTTTTGCTGGTGGAAGATGATGATTCGACACGCCATGTTGTGCGTGCTCTCTTACGGAATTGTAGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCTTAGAAGATCCTGAAAATCGCATTGATCTTGTCCTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTCTTGTTCAAGATCATGAACCACAAAACTCTGAAGAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAAGGTGCAGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAAACCTCTGGCAGCATATTTGGAGAAGATGCCACAGTGTGAGTTGA 1468 0.3781 MNNNVGKGKKGLAEQNHMFFDKKSLHNGVVNGGRGCGSSTEDDTRFNKVIEDGNNGLRGLIQIHGSLQISQQPPQGPVICWERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENRIDLVLTEVAMPILSGIGLLFKIMNHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHIWRRCHSVS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02469 216 ProSiteProfiles Response regulatory domain profile. 91 209 IPR001789 GO:0000160
Pste1g02469 216 Gene3D - 89 215 - -
Pste1g02469 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 212 IPR045279 GO:0009736
Pste1g02469 216 CDD psREC_PRR 92 195 - -
Pste1g02469 216 Pfam Response regulator receiver domain 92 203 IPR001789 GO:0000160
Pste1g02469 216 SMART REC_2 90 205 IPR001789 GO:0000160
Pste1g02469 216 FunFam Two-component response regulator-like PRR37 90 216 - -
Pste1g02469 216 SUPERFAMILY CheY-like 88 213 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02469 Pste-Chr1 9023735 9027850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02469 37 213 Response Regulator Gene Family AT5G60100 67.797 6.33e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g02469 Response_reg 1.1e-23 CL0304