Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02466 CCCTTTGGCAAAGTCTCCACATCATTAACTCAAGCTGCTCTATCTCTTTCTTCTTCTAACCACCACCTCTTCTTTTGCTTCGCGCACTTGGACAAGTTTCTAGTTCCTTCAGTTTCTCAAGGGTGTCCTGGATTCTGGTTGATGGTTGTCATGGATACGGTGGATATGAGTGACAAAGAGAAGCTTGAGGAGGATAGAAACGAGGATACTATGAATTATTCCAGTGGTACGCACTCGGATTGGAGATTTGGGAGTGCAAATCTTGCAAATTCTTCCGTTGGTTTGATTGGCTTGGGGAATTCTATGAATGTCAGCAGAGGGGATTTGATTGGTTCTTCATGTTCCTCTGCTTCAATGGTGAACTCGTTTGGGCCAAACTACTGGGATAACCCCACTAGTTCCCAAAATTTGGGATTTTGTGACATTAGTGTCCACAACAATGGGGGCACTTCAAACACTGCTGGAATCAGAAAAGATGGTTTTGTCTTTGCAAGAGCTGGTCAGAATCATCATGGGACAATTGAAATGGGTTGGAACCCTGCTAATTCTATGTTACCGAATGGGCCAGGGATGTTTCCCCACAGTTTATCTCAGTTTCCAACTGATTCTGGGTTCATTGAGAGAGCTGCAAGATTCTCATGTTTCAGTGGAGGGAATTTTGGTGACATGGTGAACTCATATGGAGTTCCTCAATCCATGGGGCTGTATGGAGCAAGGGATGTTATTCCAGGCCAGGGGTTGAAATCAGTAACTGGAGGACAATCTCAAGTAGGTGATATGAATGTAGTTGAAACAACAAAAGATGTGTCTCCATCTGTTGAGCATATGACTATTAAAGGAAGCCCTCTCAAGAGTGAGAGAAGAAGTGAAGGTCATTTTATAGCTCAAGATGAAGGGAAGCAATCTCTTGTTAGGCCTGCTAATGAGTCTGATAGAGCTGAGTCTAGTGATGATGGTGGTGGCCAAGATGATTCCCCGATTTTGGAAGGCACCAGTGGGGAACCTTCTAGCAAAGGATTAATCTCAAAGAAAAGGAAAAGAAGTGGGCAGGATGCTGATAATGATAAAGCCAATGGCGCTCCAGAACTACCTATTGATGGTGCAAGGGACAACTCTGAGAATCAACAGAAGGGAGACCAACAGCCAACTTCAACAGCCAAGGCTTCTGGGAAGAATGCTAAACTGGGGTCTCAAGCTTCTGATCCGCCTAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATAAGTGAGAGGATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCAGTAATGTTAGATGAAATCATCAACTATGTACAGTCTCTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAACCCACGGCTGGATTTTAATATTGACAGTCTTCTTGCTAAAGATATTCTTCAACAACGGCCAGGTCCTTCATCTGCACTAGGGTTTCCTATAGATATGTCCATGGCTTTTCCTCCATTACATCCACCACAACCAGGGCTGATTCATCCAATTATTCCCAACATGGCAAACTCATCTGATATCCTTCAAAGAACCATCCATCCACAGTTAGCTCCCTTGAATGGTGGTGGATTCAAGGAGCCAAATCAGCTGCCTGATGTATGGGAGGATGAGCTTCACAATGTTGTACAGATGAGCTTTGCAACCACTGCTCCCCTTAGTAGCCAAGATGTTGAT 1776 0.4443 PFGKVSTSLTQAALSLSSSNHHLFFCFAHLDKFLVPSVSQGCPGFWLMVVMDTVDMSDKEKLEEDRNEDTMNYSSGTHSDWRFGSANLANSSVGLIGLGNSMNVSRGDLIGSSCSSASMVNSFGPNYWDNPTSSQNLGFCDISVHNNGGTSNTAGIRKDGFVFARAGQNHHGTIEMGWNPANSMLPNGPGMFPHSLSQFPTDSGFIERAARFSCFSGGNFGDMVNSYGVPQSMGLYGARDVIPGQGLKSVTGGQSQVGDMNVVETTKDVSPSVEHMTIKGSPLKSERRSEGHFIAQDEGKQSLVRPANESDRAESSDDGGGQDDSPILEGTSGEPSSKGLISKKRKRSGQDADNDKANGAPELPIDGARDNSENQQKGDQQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIDSLLAKDILQQRPGPSSALGFPIDMSMAFPPLHPPQPGLIHPIIPNMANSSDILQRTIHPQLAPLNGGGFKEPNQLPDVWEDELHNVVQMSFATTAPLSSQDVD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02466 592 MobiDBLite consensus disorder prediction 339 353 - -
Pste1g02466 592 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 416 466 IPR011598 GO:0046983
Pste1g02466 592 MobiDBLite consensus disorder prediction 280 295 - -
Pste1g02466 592 Gene3D - 413 486 IPR036638 GO:0046983
Pste1g02466 592 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 300 516 IPR024097 GO:0006355
Pste1g02466 592 MobiDBLite consensus disorder prediction 369 396 - -
Pste1g02466 592 FunFam Basic helix-loop-helix transcription factor 413 485 - -
Pste1g02466 592 MobiDBLite consensus disorder prediction 267 403 - -
Pste1g02466 592 SMART finulus 422 472 IPR011598 GO:0046983
Pste1g02466 592 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 414 485 IPR036638 GO:0046983
Pste1g02466 592 MobiDBLite consensus disorder prediction 304 319 - -
Pste1g02466 592 Pfam Helix-loop-helix DNA-binding domain 419 467 IPR011598 GO:0046983
Pste1g02466 592 CDD bHLH_AtBPE_like 406 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02466 Pste-Chr1 9003982 9007019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02466 54 582 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 43.750 1.68e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g02466 HLH 7.8e-06 No_clan